Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02132 and BPUM_2768
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence pep-align/BSNT_02132___xkdF.1.24716.seq
# -bsequence pep-align/BPUM_2768___yqbD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02132___xkdF-BPUM_2768___yqbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02132___xkdF-BPUM_2768___yqbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02132___xkdF
# 2: BPUM_2768___yqbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 368
# Identity: 141/368 (38.3%)
# Similarity: 196/368 (53.3%)
# Gaps: 99/368 (26.9%)
# Score: 618.5
#
#
#=======================================
BSNT_02132___ 1 MARELRNAKISFVSYVDKAANQTEFFFTKSAKP-PSFEKKVRLFTKSEQD 49
|.|||:||||:.|||||||||:.:||..|:.|. |.|:|:|.:.||:| |
BPUM_2768___y 1 MPRELKNAKITHVSYVDKAANKKKFFLMKAKKKRPDFQKEVSVLTKAE-D 49
BSNT_02132___ 50 EQKLVYGIVYEPDVPDAHGDFMTAEEIEKAAHGFLAEAREIDINHSFEGG 99
..:||||:||||:.||||.|||||:|||:|||||:.:||.||..|.|:.|
BPUM_2768___y 50 AHRLVYGVVYEPNTPDAHQDFMTAKEIERAAHGFMKDARHIDKQHDFQDG 99
BSNT_02132___ 100 TGVVVESYVAPDDFMIGSKRITKGSWVLVTRASDEVWEQIKAGIITGYSM 149
.|.|||||:||.|..:|.:.|.||||||||:||.|:|:||:.|.||||||
BPUM_2768___y 100 VGEVVESYIAPADVEVGGELIRKGSWVLVTKASQEIWDQIQKGHITGYSM 149
BSNT_02132___ 150 AGTADV--------YEEEPVEKAGFFSVFKQMLADKTGK----------- 180
|||||: :..:...:.|.||:.|.....:.|.
BPUM_2768___y 150 AGTADIVAIEEQDRFLSQDTNERGLFSLLKNFFLKEEGANMSQPFWNILD 199
BSNT_02132___ 181 ------ETEEMRKEDMKESFEHALYPLLK--------------------- 203
::.:..:.|::.|.|. |.|:::
BPUM_2768___y 200 HLLEALQSSDADEADVRASLEQ-LIPIVQDILKTEDVLQAIGERPADVQK 248
BSNT_02132___ 204 --------RLERIEKNTDT---------EEKPEQTGDDERLKKLVEDMLA 236
:::.:||...| :::.|||| :|.::|::|.::|
BPUM_2768___y 249 EESALTTDQVQELEKAKRTIENVLQQADQQETEQTG-EEPVQKVLEQVVA 297
BSNT_02132___ 237 -----------------------------PLIERIEALELARGASKQTAD 257
|:.|||..||.|||.||||..
BPUM_2768___y 298 PIRHQLSSLEKSASREKAAMQEVLQQQLLPISERIHMLEKARGISKQTIH 347
BSNT_02132___ 258 DTGGNTEQVKKSIWSGLL 275
||..:| .|.||.|||
BPUM_2768___y 348 DTQNDT---TKPIWDGLL 362
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