Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04567 and BPUM_2735
See
DNA alignment /
Visit
BSNT_04567 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:06
# Commandline: needle
# -asequence pep-align/BSNT_04567___gbsA.1.24716.seq
# -bsequence pep-align/BPUM_2735___gbsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04567___gbsA-BPUM_2735___gbsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04567___gbsA-BPUM_2735___gbsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04567___gbsA
# 2: BPUM_2735___gbsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 402/490 (82.0%)
# Similarity: 446/490 (91.0%)
# Gaps: 1/490 ( 0.2%)
# Score: 2126.0
#
#
#=======================================
BSNT_04567___ 1 MSQTLFIDGEWISAEKEQIRSIINPFNQEEIATVSEGGREDAIKAIAAAR 50
|||||||||:|:.|:....|.||||||||.||.||||.|.||..||.|||
BPUM_2735___g 1 MSQTLFIDGQWVGAKSGDTRDIINPFNQEVIAKVSEGSRNDAQLAIKAAR 50
BSNT_04567___ 51 RAFDKGEWSSLSGLERGKIVLKIAELIRRDLEELAELESLDTGKTLEESK 100
:|||:|:|::|.|:|||.:|.|:||||||||:|||:||||||||||||||
BPUM_2735___g 51 KAFDQGDWANLPGIERGNMVFKMAELIRRDLDELAKLESLDTGKTLEESK 100
BSNT_04567___ 101 ADMDDIANVFQYYAGLADKDGGEIVSSPIPDSESKIIREPIGVCGQITPW 150
||||||||||||||||||||||||::||||:|:|:::||.:|||||||||
BPUM_2735___g 101 ADMDDIANVFQYYAGLADKDGGEIIASPIPNSKSELVREAVGVCGQITPW 150
BSNT_04567___ 151 NYPLLQASWKIAPALAAGNTIVMKPSEITPLTTIKVFKLMEEAGVPKGVA 200
||||||||||||||||||||||:|||||||||||||||||||||:|.|||
BPUM_2735___g 151 NYPLLQASWKIAPALAAGNTIVLKPSEITPLTTIKVFKLMEEAGIPSGVA 200
BSNT_04567___ 201 NLVLGPGATVGDELAVNKDVDLISFTGGIETGKKIMRAASGNVKKIALEL 250
|||||||||||||||||..|||||||||||||||||:.||||||||||||
BPUM_2735___g 201 NLVLGPGATVGDELAVNDQVDLISFTGGIETGKKIMQGASGNVKKIALEL 250
BSNT_04567___ 251 GGKNPNIVFKDADLEVAVDQALNAVFFHAGQVCSAGSRLLVEDAIHDQFL 300
|||||||||:||||:||||||:||||||||||||||||||||::|||:||
BPUM_2735___g 251 GGKNPNIVFQDADLDVAVDQAMNAVFFHAGQVCSAGSRLLVEESIHDEFL 300
BSNT_04567___ 301 AELVKRAKRIKLGNGFHAETESGPLISAEHRAKVEKYVEIGIEEGAKLET 350
.|||||.|:||||:||..||:||||||||||.||||||.||::|||||||
BPUM_2735___g 301 EELVKRTKKIKLGSGFDEETQSGPLISAEHREKVEKYVSIGLDEGAKLET 350
BSNT_04567___ 351 GGKRPEDPALQNGFFYEPTIFSNCNSDMRIVQEEVFGPVLTVETFSSEEE 400
|||||:...|.|||||.|||||.|.|:||||||||||||||||:|.:|||
BPUM_2735___g 351 GGKRPDAEELSNGFFYLPTIFSGCTSEMRIVQEEVFGPVLTVESFRTEEE 400
BSNT_04567___ 401 VIELANDTIYGLAGAVWSKDIEKCERVAARLRMGTVWINDFHPYFAQAPW 450
||||||||||||||||||.||.|.||||.:||:|||||||||||||||||
BPUM_2735___g 401 VIELANDTIYGLAGAVWSTDISKAERVARQLRLGTVWINDFHPYFAQAPW 450
BSNT_04567___ 451 GGYKQSGFGRELGKIGLEEYTEVKHVYRNTKPAAVNWFNS 490
|||||||.|||||:.|||||||:|||||||||.||:||.
BPUM_2735___g 451 GGYKQSGLGRELGRTGLEEYTELKHVYRNTKPEAVHWFQ- 489
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.