Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04466 and BPUM_2706

See DNA alignment / Visit BSNT_04466 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:01
# Commandline: needle
#    -asequence pep-align/BSNT_04466___ytjA.1.24716.seq
#    -bsequence pep-align/BPUM_2706___ytjA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04466___ytjA-BPUM_2706___ytjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04466___ytjA-BPUM_2706___ytjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04466___ytjA
# 2: BPUM_2706___ytjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 75
# Identity:      61/75 (81.3%)
# Similarity:    67/75 (89.3%)
# Gaps:           1/75 ( 1.3%)
# Score: 353.0
# 
#
#=======================================

BSNT_04466___      1 MKTLFIALIRGYQKFISPLTPPTCRFYPTCSQYGIEAIKTHGALKGGWLT     50
                     ||.:||.:||.|||.|||||||:||||||||.||:|||||||||||||||
BPUM_2706___y      1 MKQIFIGIIRFYQKCISPLTPPSCRFYPTCSNYGLEAIKTHGALKGGWLT     50

BSNT_04466___     51 IKRILKCHPFHPGGVDPVPEKKQKH     75
                     |||||||||.||||:||||.||:| 
BPUM_2706___y     51 IKRILKCHPLHPGGIDPVPPKKEK-     74


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