Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04445 and BPUM_2684
See
DNA alignment /
Visit
BSNT_04445 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:00
# Commandline: needle
# -asequence pep-align/BSNT_04445___ytoA.1.24716.seq
# -bsequence pep-align/BPUM_2684___ytoA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04445___ytoA-BPUM_2684___ytoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04445___ytoA-BPUM_2684___ytoA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04445___ytoA
# 2: BPUM_2684___ytoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 171
# Identity: 133/171 (77.8%)
# Similarity: 145/171 (84.8%)
# Gaps: 0/171 ( 0.0%)
# Score: 693.0
#
#
#=======================================
BSNT_04445___ 1 MIYPYKEHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTR 50
|||||.:..|:||.:.|:||||||||||.|||.||:||..||||||||.|
BPUM_2684___y 1 MIYPYHQFTPEIHESVFVADNATITGDVTIGEYSSVWFQTVIRGDVAPVR 50
BSNT_04445___ 51 IGNRVNIQDLSCLHQSPNKTLLIEDDATIGHQVTLHSAVIRKNALIGMGS 100
||..|||||||||||||.|||||||.|||||||||||::|||||||||||
BPUM_2684___y 51 IGKNVNIQDLSCLHQSPGKTLLIEDGATIGHQVTLHSSIIRKNALIGMGS 100
BSNT_04445___ 101 IILDGAEIGEGAFIGAGSLVPPGKIIPPDHLAFGRPAKVIRPLTEEDRKD 150
|||||||||||||||||||||.||:||...|||||||||:|.||:||.:|
BPUM_2684___y 101 IILDGAEIGEGAFIGAGSLVPQGKVIPKGSLAFGRPAKVVRQLTDEDIQD 150
BSNT_04445___ 151 MQRIRSEYVEKGQYYKFLQQT 171
|.|||.|||||||||:.|...
BPUM_2684___y 151 MDRIRREYVEKGQYYRSLISR 171
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.