Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04421 and BPUM_2671

See DNA alignment / Visit BSNT_04421 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence pep-align/BSNT_04421___ytvA.1.24716.seq
#    -bsequence pep-align/BPUM_2671___ytvA1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04421___ytvA-BPUM_2671___ytvA1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04421___ytvA-BPUM_2671___ytvA1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04421___ytvA
# 2: BPUM_2671___ytvA1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     178/267 (66.7%)
# Similarity:   214/267 (80.1%)
# Gaps:           6/267 ( 2.2%)
# Score: 936.5
# 
#
#=======================================

BSNT_04421___      1 MASFQSFGIPGQLEVIKKALDHVRVGVVITDPALEDNPIVYVNQGFVQMT     50
                     |.|...||:..|||:|||||||.|:|||||||:||||||:|||.||..||
BPUM_2671___y      1 MVSSNIFGLQKQLELIKKALDHARIGVVITDPSLEDNPIIYVNHGFTHMT     50

BSNT_04421___     51 GYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYKKDGT    100
                     ||:.:||||:||||||||.||..::|.||..:|||.|:|.|::|||||||
BPUM_2671___y     51 GYKPDEILGRNCRFLQGKDTDQKQLDLIRQGIQNKTPITTQLKNYKKDGT    100

BSNT_04421___    101 MFWNELNIDPMEIE--DKTYFVGIQKDITKQKEYEKLLEDSLTEITALST    148
                     .|||||||||:.||  |||:|:|.|||||||||||:||||||.|:|:|||
BPUM_2671___y    101 FFWNELNIDPLYIEQDDKTFFIGFQKDITKQKEYEQLLEDSLQEVTSLST    150

BSNT_04421___    149 PIVPIRNGISALPLVGNLTEERFNSIVCTLTNILSTSKDDYLIIDLSGLA    198
                     |||||:||:|||||:|.|:||||::||..||.||..|||||||:|||||.
BPUM_2671___y    151 PIVPIKNGVSALPLIGKLSEERFDAIVAKLTCILDDSKDDYLIVDLSGLI    200

BSNT_04421___    199 QVNEQTADQIFKLSHLLKLTGTELIITGIKPELAMKMNKLDANFSSLKTF    248
                     .|::..|.:||||.|||.|||||||||||||:|||||..||.:|....|:
BPUM_2671___y    201 DVDDSVAARIFKLHHLLNLTGTELIITGIKPQLAMKMKDLDTDFHDTITY    250

BSNT_04421___    249 LNVKDAVNVLPIM----    261
                     |.||:|:..||:.    
BPUM_2671___y    251 LTVKEAIKGLPLAENPV    267


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