Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01494 and BPUM_2644

See DNA alignment / Visit BSNT_01494 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_01494___ygaJ.1.24716.seq
#    -bsequence pep-align/BPUM_2644.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01494___ygaJ-BPUM_2644.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01494___ygaJ-BPUM_2644.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01494___ygaJ
# 2: BPUM_2644
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 256
# Identity:      59/256 (23.0%)
# Similarity:    90/256 (35.2%)
# Gaps:          73/256 (28.5%)
# Score: 133.5
# 
#
#=======================================

BSNT_01494___      1 MMKQIIAMGGGGFSMEPDNLSLDQYILNQSKREQPRICFLPTASG--DSQ     48
                     |.|..:.      |...|:.||......:|.:.: |:.|.||||.  :..
BPUM_2644          1 MKKMFLC------SSFKDSYSLLSDFTGESLKGK-RVTFFPTASAVEEVT     43

BSNT_01494___     49 NYIQRFYHAFQTLDCVPSHLSLFKPPSTDLTSFVMEMDVIYVGGGNTRNL     98
                     :|::....||..|......:.:.:..:.::|..:.:.||:||.||||..|
BPUM_2644         44 HYVEAAKEAFHQLGMQLETVQIAEQSTEEITKMIKQNDVMYVSGGNTFYL     93

BSNT_01494___     99 LVLWKEWGLDQILREAWKNGVVLAGLSAGAICWFEE----GVTDSAGPLT    144
                     |...::.|||.:|:|....|.:..|.|||:|.....    .:.|......
BPUM_2644         94 LQELRKHGLDDVLKEEINKGKLYIGESAGSIIMAPSIEYISLMDERQKAP    143

BSNT_01494___    145 SLKSLGFLQGSFCPHYDG--EKDRRPAYHQLISNKFLCSGYAAD------    186
                     .|.|           |.|  |..|.|..|  :.|.:|  |.||.      
BPUM_2644        144 ELSS-----------YQGFNEVSRYPVPH--VHNTYL--GDAAQQILKQY    178

BSNT_01494___    187 ----------DGAALHFINDQ-LFQTVSSRSEGKAYRVMMAEHEIAEIPL    225
                               |..||....:| :.:|..|.                    
BPUM_2644        179 EKTLDLCPLTDEQALLITGEQAVIKTAKSA--------------------    208

BSNT_01494___    226 PVKYLG    231
                           
BPUM_2644        208 ------    208


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