Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04368 and BPUM_2643
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence pep-align/BSNT_04368___ytkP.1.24716.seq
# -bsequence pep-align/BPUM_2643___ytkP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04368___ytkP-BPUM_2643___ytkP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04368___ytkP-BPUM_2643___ytkP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04368___ytkP
# 2: BPUM_2643___ytkP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity: 236/311 (75.9%)
# Similarity: 273/311 (87.8%)
# Gaps: 2/311 ( 0.6%)
# Score: 1239.0
#
#
#=======================================
BSNT_04368___ 1 MLKIVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAY 50
:|:..|.|:||||||||:|.||||:|||.||||||.|||||||||||||
BPUM_2643___y 1 -MKVAQNIAELIGDTPLVQLQRLQPDNAAAVYLKLESFNPSGSVKDRAAY 49
BSNT_04368___ 51 QMIIEAEQNGLLKPGSVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMT 100
.||:|||:.|.|..|:.||||||||||||||||||||||:||||||||||
BPUM_2643___y 50 NMIVEAEKQGKLTKGATIIEPTSGNTGIGLAMNAAARGYQAILVMPDTMT 99
BSNT_04368___ 101 KERINLLKAYGAEVVLTPGEERMPGSIKKAKELAEQIPNSYIPMQFDNTA 150
|||||:||||||:|:||||||:|||.|:||:|||.|||:|:|||||||.|
BPUM_2643___y 100 KERINILKAYGAQVILTPGEEKMPGCIRKAEELAAQIPHSFIPMQFDNRA 149
BSNT_04368___ 151 NPDAHRKTTAPEIARAIEEIGKPLGAFVASSGTGGTITGTGEALKELFPD 200
||||||.|||.||..|:::||||||||||::|||||||||||.||:.||.
BPUM_2643___y 150 NPDAHRGTTAVEIMDAVKQIGKPLGAFVATAGTGGTITGTGEELKKAFPQ 199
BSNT_04368___ 201 ITVHVVEPAGSPVLSGGKPGAHKLVGTSPGFIPPILNEDVYDEIIKISDE 250
:|:.|.||.||||||||.||.||||||||||||.||||.|||||:::|||
BPUM_2643___y 200 LTIRVAEPKGSPVLSGGTPGKHKLVGTSPGFIPQILNEHVYDEIVQVSDE 249
BSNT_04368___ 251 DAYTTTRRLAAEEGILVGPSSGAACFAAIETAKRLSPDKVVVCMTADTGE 300
||||.||:||..|||||||||||||:|||||||:|..|::|:||||||||
BPUM_2643___y 250 DAYTITRQLARLEGILVGPSSGAACYAAIETAKQLPADQIVICMTADTGE 299
BSNT_04368___ 301 RYLSTDLWSFI 311
||||:|::..
BPUM_2643___y 300 RYLSSDVYQD- 309
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