Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04343 and BPUM_2627

See DNA alignment / Visit BSNT_04343 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:53
# Commandline: needle
#    -asequence pep-align/BSNT_04343.1.24716.seq
#    -bsequence pep-align/BPUM_2627___ytpT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04343-BPUM_2627___ytpT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04343-BPUM_2627___ytpT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04343
# 2: BPUM_2627___ytpT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 994
# Identity:     538/994 (54.1%)
# Similarity:   647/994 (65.1%)
# Gaps:         146/994 (14.7%)
# Score: 2398.5
# 
#
#=======================================

BSNT_04343         1 MSWLHKFFDLFLGESEEDAERETKPAQIP--QQQEVHHPEGQLKRLEDPK     48
                                           .:|.:.|  .:|.|.....:.|::||.|
BPUM_2627___y      1 ----------------------MRPEEGPVAPKQPVFEQHKEYKKIEDTK     28

BSNT_04343        49 IYYEYPKGKFRFPVVPDGYKNHDLRRRRTPSDEPKSAPRPSAAPYRERPR     98
                     :|||||.|.||||:||               |||:   |......|.||:
BPUM_2627___y     29 VYYEYPTGNFRFPLVP---------------DEPQ---RDGVKQERRRPK     60

BSNT_04343        99 NEE---EQHTYQAAEPA-----KKPFKPTNIPSPIYGFNQKPSVKKDVPK    140
                     ..:   :|.|||:.:..     ||||||..|||||||::|....|:...|
BPUM_2627___y     61 QGQPLAKQKTYQSKQTVQPDTNKKPFKPEQIPSPIYGYHQDMRPKRTEAK    110

BSNT_04343       141 KPSETLNEPDKSVKEKVTLLSEEIERERGYPASDTPAHSKKESPFFPDTQ    190
                     :...::........::|||||||.||||...........:||     :..
BPUM_2627___y    111 EELSSVQMKAAETAQRVTLLSEEAERERNVRQQMNIPSIRKE-----NRM    155

BSNT_04343       191 FEKQPSGVLNRKDMEHD-------EALAKRPAEPSGNKVPFESGVQQPEK    233
                     .|..|:.|..|.|::.|       |.||......|..:...:..:.|.|:
BPUM_2627___y    156 EETVPAPVEERVDVKTDVTPLTLQEELAYHDHVQSTMERLNDEPLNQTEE    205

BSNT_04343       234 EEPFFPA-----------EQAEEQTPPEMLTDTAAEGLSDSEVGREEPAT    272
                     :||.|..           :|||....|.:.|:...:...::|..::||. 
BPUM_2627___y    206 KEPAFSEPQDYIEADLHNQQAEVYHEPPVETEPVQDVSGENEEIQDEPV-    254

BSNT_04343       273 AEEEQREQQPEKLEEPVF-SAE-----LDEEQTAPESQTEAVSEDEKAKE    316
                        ||...:.:::|...| :||     ::.|...|..:.|.:  |:.:.|
BPUM_2627___y    255 ---EQFVDKTQEIEPLTFETAENTHSAIEMEVDMPAEEVEVL--DDISAE    299

BSNT_04343       317 P-----SDSPVYNHHENAAEGAESPFVQEEQMDIRQEEPLFTDHEYSSEA    361
                     |     :||.: :|.|.....|           :.:.||:   .||.   
BPUM_2627___y    300 PVEEIEADSTL-DHQEEVPAAA-----------LEETEPV---AEYD---    331

BSNT_04343       362 LAQAETVAKESEEPIINNHYDILGEAQETKIDVQPDSHTELEKTEH-MEQ    410
                      .|.:.|.:|:|          :.|.|...|:.:.|..|..|:.|. :||
BPUM_2627___y    332 -LQEDQVIEEAE----------IVEDQVMPIEKEADEQTATERVEPVIEQ    370

BSNT_04343       411 GSKSSTAPLENRQGIRADKPREASAEPKKRPGAQEKRTEQSASSQKGPSV    460
                     ..|..  |:..   :..:||::||.:|            |.||.|.. :|
BPUM_2627___y    371 QEKQE--PVHE---VMEEKPKQASPQP------------QRASGQTS-TV    402

BSNT_04343       461 PFNVMMLKRD--THKQQKAEERRGSYVFPNVALLDVPPAQVQDDTAWIEE    508
                     ||||||||.|  ...|:||.:.:| ||||::|||||||||.::|..|::|
BPUM_2627___y    403 PFNVMMLKSDQRVQGQKKAADAKG-YVFPSLALLDVPPAQKEEDGTWVKE    451

BSNT_04343       509 QRQLLDLTLKNFNVRANVVHVTQGPSVTRFEVHPEPGVKVNKITNLSDDI    558
                     :.:||:.|||||||||:|||||||||||||||||||||||||||||||||
BPUM_2627___y    452 RAELLNATLKNFNVRASVVHVTQGPSVTRFEVHPEPGVKVNKITNLSDDI    501

BSNT_04343       559 KLSLSARDIRIEAPIPGKNTIGIEVPNRTSKVVDLRQMIRSSAFRTSKSP    608
                     ||||||:||||||||||||||||||||..||:|.||:||||||||.:.||
BPUM_2627___y    502 KLSLSAKDIRIEAPIPGKNTIGIEVPNLHSKMVFLREMIRSSAFRDNPSP    551

BSNT_04343       609 LTAALGLDISGNPVVIDLKKMPHGLIAGATGSGKSVCINTILVSLLYKAD    658
                     |||||||||||.|||:||:||||||||||||||||||||||||||::||.
BPUM_2627___y    552 LTAALGLDISGQPVVVDLQKMPHGLIAGATGSGKSVCINTILVSLMFKAS    601

BSNT_04343       659 PSEVKVLLIDPKMVELAPYNKIPHLVSPVITDAKAATAALKWVVEEMERR    708
                     |.|||:||||||||||||||.|||||||||||||.|||||||||:|||||
BPUM_2627___y    602 PDEVKMLLIDPKMVELAPYNHIPHLVSPVITDAKTATAALKWVVDEMERR    651

BSNT_04343       709 YELFAHSGVRDIDRFNQLTAEHQMGEKLPYLVVIIDELADLMMVAPNDVE    758
                     ||||||||||:|.|||:|..|.|||||||||||:|||||||||||||:||
BPUM_2627___y    652 YELFAHSGVREIKRFNELVKEKQMGEKLPYLVVVIDELADLMMVAPNEVE    701

BSNT_04343       759 ESIARIAQKARACGIHLLVATQRPSVDVITGLIKANIPTRIAFSVSSQVD    808
                     |||.||||||||||||||:|||||||||||||||||||||||||||||||
BPUM_2627___y    702 ESICRIAQKARACGIHLLIATQRPSVDVITGLIKANIPTRIAFSVSSQVD    751

BSNT_04343       809 SRTIIDIAGAEKLLGKGDMLFLENGSGKPVRLQGNFVSDREIDRVVSHVR    858
                     ||||||:||||||||||||||||||||||.|||||||||||||.||:|||
BPUM_2627___y    752 SRTIIDMAGAEKLLGKGDMLFLENGSGKPTRLQGNFVSDREIDEVVAHVR    801

BSNT_04343       859 SQMPPTYLFEQEELVRQGSALKEEDELFYEACEFVVEQNSASTSSLQRRF    908
                     .|..|.:|||||||:.||||:.:|||||.:||.|.:||||||||||||||
BPUM_2627___y    802 KQRKPVFLFEQEELMLQGSAITDEDELFMDACRFAIEQNSASTSSLQRRF    851

BSNT_04343       909 RIGYNRAARLIDMMEAEGMISEAKGSKPREVLITASDLINE---    949
                     |||||||||||||||.|||||.||||||||||:|.|||  |   
BPUM_2627___y    852 RIGYNRAARLIDMMEREGMISGAKGSKPREVLMTLSDL--EQLI    893


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04343 and BPUM_2627

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
