Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04319 and BPUM_2610
See
DNA alignment /
Visit
BSNT_04319 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence pep-align/BSNT_04319___rpsD.1.24716.seq
# -bsequence pep-align/BPUM_2610___rpsD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04319___rpsD-BPUM_2610___rpsD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04319___rpsD-BPUM_2610___rpsD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04319___rpsD
# 2: BPUM_2610___rpsD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 181/200 (90.5%)
# Similarity: 194/200 (97.0%)
# Gaps: 0/200 ( 0.0%)
# Score: 952.0
#
#
#=======================================
BSNT_04319___ 1 MARYTGPSWKLSRRLGISLSGTGKELEKRPYAPGPHGPGQRKKLSEYGLQ 50
||||||||||:|||||||||||||||||||||||||||||||||||||||
BPUM_2610___r 1 MARYTGPSWKISRRLGISLSGTGKELEKRPYAPGPHGPGQRKKLSEYGLQ 50
BSNT_04319___ 51 LQEKQKLRHMYGVNERQFRTLFDKAGKLAGKHGENFMILLDSRLDNVVYK 100
|||||||||||||||||||||||||.||.||.||||||||::||||:||:
BPUM_2610___r 51 LQEKQKLRHMYGVNERQFRTLFDKAAKLPGKQGENFMILLETRLDNLVYR 100
BSNT_04319___ 101 LGLARTRRQARQLVNHGHILVDGSRVDIPSYLVKPGQTIGVREKSRNLSI 150
||||||||||||||||||||||||||||||:.|||||||.:||||:||::
BPUM_2610___r 101 LGLARTRRQARQLVNHGHILVDGSRVDIPSFSVKPGQTIALREKSQNLAV 150
BSNT_04319___ 151 IKESVEVNNFVPEYLTFDAEKLEGTFTRLPERSELAPEINEALIVEFYSR 200
:|||||||:||||||||||||||||||||||||||||||:|.||||||||
BPUM_2610___r 151 VKESVEVNSFVPEYLTFDAEKLEGTFTRLPERSELAPEISEQLIVEFYSR 200
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.