Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04299 and BPUM_2585

See DNA alignment / Visit BSNT_04299 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence pep-align/BSNT_04299___sppA.1.24716.seq
#    -bsequence pep-align/BPUM_2585___sppA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04299___sppA-BPUM_2585___sppA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04299___sppA-BPUM_2585___sppA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04299___sppA
# 2: BPUM_2585___sppA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity:     232/335 (69.3%)
# Similarity:   281/335 (83.9%)
# Gaps:           2/335 ( 0.6%)
# Score: 1193.0
# 
#
#=======================================

BSNT_04299___      1 MNAKRWIALVIALGIFGVSIIVSISMSFFESVKGAQTDLTSLTDESQEKT     50
                     ||||||:||:||||:||.||::|::.:.:||....:... ...||.:||.
BPUM_2585___s      1 MNAKRWVALIIALGVFGFSIVISVTTALYESFNDNKMSY-QFGDEIEEKV     49

BSNT_04299___     51 LENGSLSSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDK    100
                     ||:||.:.||||||::|||||||.:|||||.:||:||.|||.||:||||.
BPUM_2585___s     50 LEDGSGAGKIAVLEINGTIQDNGGASSLLGGEGYDHRAFLKELEKAKDDA     99

BSNT_04299___    101 TVKGIVLKVNSPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAASGGY    150
                     :|||::|:||||||||||||||||||||:|| .|||||||||||||||||
BPUM_2585___s    100 SVKGVLLRVNSPGGGVYESAEIHKKLEEVKK-AKKPIYVSMGSMAASGGY    148

BSNT_04299___    151 YISAAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHKD    200
                     |:|..|.||||:||||||||||||:|:|||||||.|||.:||||||..||
BPUM_2585___s    149 YVSTPAKKIFASPETLTGSLGVIMQSLNYSKLADNLGIKYETIKSGKFKD    198

BSNT_04299___    201 IMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRSMSKAEVKKIADGRV    250
                     ||||:|:|||:|::||||||||||||||.|||:||.|||.:|||||||||
BPUM_2585___s    199 IMSPNRDMTKDERDIMQSMVDNSYEGFVKVISEGRGMSKQDVKKIADGRV    248

BSNT_04299___    251 YDGRQAKKLNLVDELGFYDDTITAMKKDHKDLKNASVISYEESFGLGSLF    300
                     |||.|||...||||||:|:|.|.||||:.|.||.|:||||.:|||..|||
BPUM_2585___s    249 YDGTQAKSNGLVDELGYYEDAIKAMKKNEKGLKGATVISYSQSFGWNSLF    298

BSNT_04299___    301 SMGANKMFKSEIDFLNMREILSQSGSPRMMYLYAK    335
                     :|.|:|:|||||||||::|.|:.|...:.||||:|
BPUM_2585___s    299 NMSASKLFKSEIDFLNLKETLAGSNGSKPMYLYSK    333


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