Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04269 and BPUM_2566
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence pep-align/BSNT_04269___dnaE.1.24716.seq
# -bsequence pep-align/BPUM_2566___dnaE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04269___dnaE-BPUM_2566___dnaE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04269___dnaE-BPUM_2566___dnaE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04269___dnaE
# 2: BPUM_2566___dnaE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1115
# Identity: 751/1115 (67.4%)
# Similarity: 912/1115 (81.8%)
# Gaps: 4/1115 ( 0.4%)
# Score: 3959.0
#
#
#=======================================
BSNT_04269___ 1 MSFVHLQVHSGYSLLNSAAAVEELVSEADRLGYASLALTDDHVMYGAIQF 50
||:||||||||||||:|||.|:|||.:|..|||.:|||||||||||.::|
BPUM_2566___d 1 MSYVHLQVHSGYSLLSSAAKVKELVLKAKELGYKALALTDDHVMYGTVEF 50
BSNT_04269___ 51 YKACKARGINPIIGLTASVFTDDSELEAYPLVLLAKSNTGYQNLLKISSV 100
||.||...|.|:||||||||.|:.|.||||||||||:|.|||||:|||||
BPUM_2566___d 51 YKECKKHDIKPVIGLTASVFIDEQETEAYPLVLLAKNNEGYQNLIKISSV 100
BSNT_04269___ 101 LQSKSKGGLKPKWLHSYREGIIAITPGEKGYIETLLEGGLFEQAAQASLE 150
|:||||.|||.|||.||..|:||||||..|||||||:....|:|..|:.:
BPUM_2566___d 101 LKSKSKAGLKEKWLKSYHRGLIAITPGVSGYIETLLQHDQIEEAHHAAKQ 150
BSNT_04269___ 151 FQSIFGKGAFYFSYQPFKGNQVLSEQILKLSEETGIPVTATGDVHYIRKE 200
.:.|||:|..|.:.|||:.::.|..::..:|:...||:.||||||||::|
BPUM_2566___d 151 LKHIFGEGHVYIALQPFQQDESLVAKLRDVSKMADIPLVATGDVHYIKRE 200
BSNT_04269___ 201 DKAAYRCLKAIKAGEKLTDAPAEDLPDLDLKPLEEMQNIYREHPEALQAS 250
||.||.||||||||::|.:. .||..:...:..|||:..|.:..|.|..:
BPUM_2566___d 201 DKMAYTCLKAIKAGQQLPEV-EEDRAEKHFRTFEEMKEWYTQDTELLTRT 249
BSNT_04269___ 251 VEIAEQCRVDVSLGQTRLPSFPTPDGTSADDYLTDICMEGLRSRFGKPDE 300
||||::|.||::||||:|||:||||.::||.:|..:|.||::.|....::
BPUM_2566___d 250 VEIADRCEVDLNLGQTKLPSYPTPDQSTADQFLRKVCAEGMKQRKIASND 299
BSNT_04269___ 301 RYLRRLQYELDVIKRMKFSDYFLIVWDFMKHAHEKGIVTGPGRGSAAGSL 350
.|::||:|||.:|::|.|||||||||||||:||::|||||||||||||||
BPUM_2566___d 300 AYVKRLEYELSIIQKMNFSDYFLIVWDFMKYAHDQGIVTGPGRGSAAGSL 349
BSNT_04269___ 351 VAYVLYITDVDPIKHHLLFERFLNPERVSMPDIDIDFPDTRRDEVIQYVQ 400
|||||:||||||:.|.|||||||||||:||||||||||||||||:|.||:
BPUM_2566___d 350 VAYVLFITDVDPLCHGLLFERFLNPERISMPDIDIDFPDTRRDEIISYVK 399
BSNT_04269___ 401 QKYGAMHVAQIITFGTLAAKAALRDVGRVFGVSPKEADQLAKLIPSRPGM 450
.|||.||||||:|||||||||||||||||.|:..|.||:|||||||:||.
BPUM_2566___d 400 DKYGDMHVAQIVTFGTLAAKAALRDVGRVMGIDSKAADRLAKLIPSKPGT 449
BSNT_04269___ 451 TLDEARQQSPQLDKRLRESSLLQQVYSIARKIEGLPRHASTHAAGVVLSE 500
||.||...||:|...|::|..|.||:..|.|:||||||.|||||||||||
BPUM_2566___d 450 TLKEALTASPELKTMLQQSEELSQVFQTALKVEGLPRHTSTHAAGVVLSE 499
BSNT_04269___ 501 EPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLRNLTLIESITS 550
||||::||:|:||:|:|||||||::|||||||||||||||||||||||.:
BPUM_2566___d 500 EPLTEIVPIQDGHDGVYLTQYAMNYLEDLGLLKMDFLGLRNLTLIESIKN 549
BSNT_04269___ 551 MIEKEENIKIDLSSISYSDDKTFSLLSKGDTTGIFQLESAGMRSVLKRLK 600
.||::||:.|:.|.|||.|.|||.|||.|||||||||||.|||.||:|||
BPUM_2566___d 550 QIERQENVHINFSDISYEDQKTFELLSAGDTTGIFQLESQGMRQVLRRLK 599
BSNT_04269___ 601 PSGLEDIVAVNALYRPGPMENIPLFIDRKHGRAPVHYPHEDLRSILEDTY 650
||.|||||||||||||||||||||||||||||..|.|||.||..||:|||
BPUM_2566___d 600 PSSLEDIVAVNALYRPGPMENIPLFIDRKHGRVKVSYPHPDLYDILKDTY 649
BSNT_04269___ 651 GVIVYQEQIMMIASRMAGFSLGEADLLRRAVSKKKKEILDRERSHFVEGC 700
||||||||||:||::||||.||||||||||||||.|::||.|||||||||
BPUM_2566___d 650 GVIVYQEQIMLIAAKMAGFQLGEADLLRRAVSKKDKKVLDEERSHFVEGC 699
BSNT_04269___ 701 LKKEYSVDTANEVYDLIVKFANYGFNRSHAVAYSMIGCQLAYLKAHYPLY 750
|||||.|:.||:|||||||||||||||||||||||||.||||||||||||
BPUM_2566___d 700 LKKEYPVNIANDVYDLIVKFANYGFNRSHAVAYSMIGFQLAYLKAHYPLY 749
BSNT_04269___ 751 FMCGLLTSVIGNEDKISQYLYEAKGSGIRILPPSVNKSSFPFTVENGSVR 800
||||||||||||:||::||.||||..||.:|.||:|||.||||||.|.:|
BPUM_2566___d 750 FMCGLLTSVIGNQDKVAQYFYEAKEKGISVLKPSINKSEFPFTVEKGEIR 799
BSNT_04269___ 801 YSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKSVNRKMLEALI 850
|||||||:||||||||||:||:|||||||||||.||.:||||||.:||||
BPUM_2566___d 800 YSLRAIKNVGVSAVKDIYRARQEKPFEDLFDFCARVSAKSVNRKTIEALI 849
BSNT_04269___ 851 FSGAMDEFGQNRATLLASIDVALEHAELFAADDDQMGLFLDESFSIKPKY 900
|||||||...|||:||||||:||:|.. |...|||:....|.:|||||||
BPUM_2566___d 850 FSGAMDELYPNRASLLASIDIALDHVS-FLNPDDQLDFLGDTTFSIKPKY 898
BSNT_04269___ 901 VETEELPLVDLLAFEKETLGIYFSNHPLSAFRKQLTAQGAVSILQAQRAV 950
.|.|||||||||.||||.||:|.||||:.|:|.:|...|||.|::....:
BPUM_2566___d 899 AEIEELPLVDLLQFEKEALGLYLSNHPVQAYRDRLRENGAVEIIRLSSFI 948
BSNT_04269___ 951 KRQLSLGVLLSKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLSP 1000
||::|:|.||:|:|:||||.||:|||:|..|||||||.||||||||:|||
BPUM_2566___d 949 KRKVSMGGLLTKVKSIRTKNGQSMAFVTFGDETGEMEGVVFPEQFRKLSP 998
BSNT_04269___ 1001 VLREGALLFTAGKCEVRQDKIQFIMSRAELLENMDAEKAPSVYIKIESSQ 1050
:|.|||:|:..|:.:||.|..|.|:..|.|||.|..::..||||:::...
BPUM_2566___d 999 LLEEGAMLYVEGRIDVRNDSSQIIVQEAVLLEEMGTQRKESVYIRVKEEN 1048
BSNT_04269___ 1051 HSQEILAKIKRILLEHKGETGVYLYYERQKQTIKLPESFHINADHQVLYR 1100
|:||:|.::||::..|.|...||||||:||:|::||:::.::|||.|:::
BPUM_2566___d 1049 HTQELLEQVKRVISMHSGGADVYLYYEKQKKTVRLPDAYKVHADHAVIFQ 1098
BSNT_04269___ 1101 LKELLGQKNVVLKQW 1115
||||||::|||:|
BPUM_2566___d 1099 LKELLGEQNVVIK-- 1111
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