Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04258 and BPUM_2559
See
DNA alignment /
Visit
BSNT_04258 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence pep-align/BSNT_04258___ytvI.1.24716.seq
# -bsequence pep-align/BPUM_2559___ytvI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04258___ytvI-BPUM_2559___ytvI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04258___ytvI-BPUM_2559___ytvI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04258___ytvI
# 2: BPUM_2559___ytvI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 202/372 (54.3%)
# Similarity: 265/372 (71.2%)
# Gaps: 1/372 ( 0.3%)
# Score: 1007.0
#
#
#=======================================
BSNT_04258___ 1 MNQSYITIFFRTLFVISMTAGSIAAAYYSFPLTYPFLIALILSSVIHPVV 50
||.:|:.||.|:|.:||:...::...|.|||..|||.||||:|.:|||||
BPUM_2559___y 1 MNHTYMAIFLRSLMMISIAVFAVVFLYQSFPFLYPFWIALIVSCLIHPVV 50
BSNT_04258___ 51 DYLDKVTGFPRTINVLGVLAFFLLAAFGVLTILVAEIVTGTAYLAKTLPP 100
..::::||.||...|:.||..||:.|.|.:|:|||||::|:|||||.||.
BPUM_2559___y 51 CKIEEITGMPRGFVVVIVLLLFLVLAAGFITLLVAEIISGSAYLAKVLPG 100
BSNT_04258___ 101 HISTFISYCEKLFTTHIQPLYNELTLLFQELETNQQASIVTHIQTLGDSA 150
|:...|...|:.||..|.|||:::|..|..|:..|:.||:..||.|||.|
BPUM_2559___y 101 HLDQIIGIVERFFTDKILPLYHDVTAQFNTLQAGQKESILGQIQALGDEA 150
BSNT_04258___ 151 AKNAGLLLSHILEMIPRFFALLPNTAAVLIFSLLATFFMTKDWHKLKAML 200
|...|..||..||:||.|..|||:.||.|:||.|||||:||||..||...
BPUM_2559___y 151 AAKIGTFLSKTLELIPAFLGLLPDAAATLLFSALATFFITKDWFTLKKYG 200
BSNT_04258___ 201 VLILPDRVTANSKAISSELKKAMTGFIKAQAVLVFITMVIVFIGLSLLKV 250
..|.|.:...:::||.||:|||:|||:|||.:||.:|:.:|.|||.:|||
BPUM_2559___y 201 SRIFPAKWMQHTRAILSEIKKAITGFMKAQLLLVAMTIGLVIIGLIILKV 250
BSNT_04258___ 251 EHAATIAFLIGLVDLLPYLGAGSVFVPWILYLSITGQLPQAIGIGILYLV 300
|||..||..||.||||||:|:|:||:|||:|.::||.|..|||:||||:|
BPUM_2559___y 251 EHALVIALCIGFVDLLPYIGSGTVFLPWIIYSAMTGNLSLAIGLGILYIV 300
BSNT_04258___ 301 VLIQRQLTEPKILSKSIGIDPLATLIALFAGFKLFGFLGLIAGPAVLVII 350
||||||::|||:||||||::|||||:|||.|.|.||||||:.|||.||:.
BPUM_2559___y 301 VLIQRQISEPKVLSKSIGLNPLATLVALFVGLKWFGFLGLVIGPASLVVW 350
BSNT_04258___ 351 QAFITTGALKEIWSYITV-QQK 371
|||...|...:|:.||.. .||
BPUM_2559___y 351 QAFRNAGVFSDIYQYIRYGMQK 372
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.