Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04248 and BPUM_2552

See DNA alignment / Visit BSNT_04248 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence pep-align/BSNT_04248___phoR.1.24716.seq
#    -bsequence pep-align/BPUM_2552___phoR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04248___phoR-BPUM_2552___phoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04248___phoR-BPUM_2552___phoR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04248___phoR
# 2: BPUM_2552___phoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 586
# Identity:     317/586 (54.1%)
# Similarity:   421/586 (71.8%)
# Gaps:          13/586 ( 2.2%)
# Score: 1604.0
# 
#
#=======================================

BSNT_04248___      1 MNKYRVRLFSVFVVCMILVFCVLGLFLQQLFETSDQRKAEEHIEKEAKYL     50
                     |:|.|.||||..:..:.:||..|||||..:|....:.|..|.:|||:.:|
BPUM_2552___p      1 MSKIRTRLFSGLIFLLFIVFVALGLFLDHMFHVFYETKLTERMEKESSFL     50

BSNT_04248___     51 ASLLDAGNLNNQANEKIIKDAGGALDVSASVIDTDGKVLYGSNGRSADSQ    100
                     .|.::..:|..:.|::::..|....|::||::|..|.::: :.|::....
BPUM_2552___p     51 LSSMNGDDLKAKQNKEVLNQAKQHFDMNASIVDVKGNIIH-TTGQAEQKA     99

BSNT_04248___    101 KVQALVSGH----EGIL--STTDNKLYYGLSLRSEGEKTGYVLLSAS-EK    143
                     .:|..::..    :|::  ...|...:|.:.:..:.|..||:.|.|| |.
BPUM_2552___p    100 VIQNTLNNERLQTKGVVIDDEKDALFHYAVPILKQNEPAGYLFLQASYEP    149

BSNT_04248___    144 SDGLKGELWGMLTASLCTAFIVIVYFYSSMTSRYKRSIESATNVATELSK    193
                     .:.:.|:||..|...|.:|.|:||:|...|:.:|.:.|:.||.||.:|.:
BPUM_2552___p    150 LNEIDGQLWLALAFCLGSAIIIIVFFGYRMSMKYVKPIDYATKVAKQLER    199

BSNT_04248___    194 GNYDARTYGGYIRRSDKLGHAMNSLAIDLMEMTRTQEMQRDRLLTVIENI    243
                     ||||...|...:..:.:|..:|..||..|.|||...|||||||.||||||
BPUM_2552___p    200 GNYDTNHYEELMIETSELNTSMKRLAGSLQEMTSAGEMQRDRLQTVIENI    249

BSNT_04248___    244 GSGLIMIDGRGFINLVNRSYAKQFHINPNHMLRRLYHDAFEHEEVIQLVE    293
                     |:|:|:||..|:|:||||::.|||.:..:..:.:|||:||.|||:|:|::
BPUM_2552___p    250 GAGIILIDKMGYIHLVNRTFRKQFKVQKHIYMHKLYHEAFTHEEIIELID    299

BSNT_04248___    294 DIFMTETKKCKLLRLPIKIERRYFEVDGVPIMGPDDEWKGIVLVFHDMTE    343
                     :|||||||..|.|||.:.||||||:||||||:..|||||||||||||:||
BPUM_2552___p    300 EIFMTETKVRKFLRLAVDIERRYFQVDGVPILSTDDEWKGIVLVFHDVTE    349

BSNT_04248___    344 TKKLEQMRKDFVANVSHELKTPITSIKGFTETLLDGAMEDKEALSEFLSI    393
                     ||:||||||||||||||||||||||||||:|||||||::|||||:|||||
BPUM_2552___p    350 TKQLEQMRKDFVANVSHELKTPITSIKGFSETLLDGAIDDKEALTEFLSI    399

BSNT_04248___    394 ILKESERLQSLVQDLLDLSKIEQQNFTLSIETFEPAKMLVEIETLLKHKA    443
                     |||||.||::|:||||||||||||.|.|:|:.....::|.||:.||..||
BPUM_2552___p    400 ILKESVRLETLIQDLLDLSKIEQQQFKLNIQEANATEILQEIQVLLNQKA    449

BSNT_04248___    444 DEKGISLHLNVPKDPQYVSGDPYRLKQVFLNLVNNALTYTPEGGSVAINV    493
                     .||||.||:.|||:|.||..||.||||:||||||||||||||||||.|:.
BPUM_2552___p    450 TEKGIQLHVRVPKEPVYVMADPLRLKQIFLNLVNNALTYTPEGGSVTISA    499

BSNT_04248___    494 KPREKDIQIEVADSGIGIQKEEIPRIFERFYRVDKDRSRNSGGTGLGLAI    543
                     :||:...:.:|||:|||::|.|||||||||||:|||||||||||||||||
BPUM_2552___p    500 RPRKGAYEFDVADTGIGMKKSEIPRIFERFYRIDKDRSRNSGGTGLGLAI    549

BSNT_04248___    544 VKHLIEAHEGKIDVTSEPGRGTVFTVTLKRAAEKSA    579
                     ||||:|||||.|.|.|:.|:||.|||:||..     
BPUM_2552___p    550 VKHLVEAHEGTISVRSKQGKGTTFTVSLKST-----    580


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