Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04227 and BPUM_2540

See DNA alignment / Visit BSNT_04227 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:45
# Commandline: needle
#    -asequence pep-align/BSNT_04227___ytxC.1.24716.seq
#    -bsequence pep-align/BPUM_2540___ytxC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04227___ytxC-BPUM_2540___ytxC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04227___ytxC-BPUM_2540___ytxC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04227___ytxC
# 2: BPUM_2540___ytxC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     143/289 (49.5%)
# Similarity:   203/289 (70.2%)
# Gaps:           8/289 ( 2.8%)
# Score: 769.0
# 
#
#=======================================

BSNT_04227___      1 MLEIIFEDDHDAAAFLHLIQHSDDRNNIIVHEGIRKIGIEKANPAFPIQR     50
                     ||||||||::|.||||||.:|.|.|:::.:.:|..::.||.......::.
BPUM_2540___y      1 MLEIIFEDEYDTAAFLHLAEHLDSRHHMSIQQGKDRLLIEAKESKEGLEP     50

BSNT_04227___     51 FMEPILVKFFLECKEDEHMLSLIEETYCFTDQDEQQQILQLAHSIIEGEA    100
                     .:.|:||.|||||||:|.|.|::|.||.|.|.:||.|||.:||||:.|:.
BPUM_2540___y     51 IVRPLLVHFFLECKENERMRSILENTYLFKDPEEQHQILSIAHSIMNGDL    100

BSNT_04227___    101 ADLPFEPLKLSRKQSILDELQTICLEEGVFYIRSFQTFRLGSYYKQLRDI    150
                     .|:|....:.||:..:..||:||.|.:|:|.|.||.||||..|.::|::.
BPUM_2540___y    101 DDIPGIHQEPSREALLTKELETISLHQGIFSIGSFMTFRLSEYDRRLKNY    150

BSNT_04227___    151 TEAAIDEYKMEQEYQNFIQTLRDYVNAKQPRIKKVHIVHDGSFTLWELRY    200
                     .|.:|:|||||||||||||:|||||.||:|:::|||:||.....:||.||
BPUM_2540___y    151 VEVSIEEYKMEQEYQNFIQSLRDYVMAKEPKLEKVHVVHQDRLMIWEFRY    200

BSNT_04227___    201 VPEREKMKYIDRRFVRDHPMYIDSHLLAPLISIAPDEVVLYTDQPEHMMA    250
                     ..||::.:||||:|||:|||||||.|:|||:||||.::.|:|:...|.|.
BPUM_2540___y    201 ASERDQKQYIDRQFVREHPMYIDSQLIAPLVSIAPQKIDLFTNDTGHSMV    250

BSNT_04227___    251 RTIQNVFQERVEMLPLHAFTDAEI-----PVKQSKG---    281
                     :||||:||||||:.|.|:|.:..:     .::|...   
BPUM_2540___y    251 QTIQNIFQERVEVFPAHSFQEHHVRFVHDHLEQKSEKLS    289


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