Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04219 and BPUM_2535

See DNA alignment / Visit BSNT_04219 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence pep-align/BSNT_04219___lytT.1.24716.seq
#    -bsequence pep-align/BPUM_2535___lytT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04219___lytT-BPUM_2535___lytT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04219___lytT-BPUM_2535___lytT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04219___lytT
# 2: BPUM_2535___lytT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     164/247 (66.4%)
# Similarity:   199/247 (80.6%)
# Gaps:           8/247 ( 3.2%)
# Score: 828.5
# 
#
#=======================================

BSNT_04219___      1 MLRVLIVDDEMLARDELAYLLKRANEEMEIHEAENIESAFDQMMDQKPDL     50
                     |:.|||||||:||||||.|||.|..|:::|.||||||||||:|:|.||||
BPUM_2535___l      1 MINVLIVDDEVLARDELKYLLHRTKEDVQIEEAENIESAFDRMVDHKPDL     50

BSNT_04219___     51 LFLDVDLSGENGFDIAKRLKKMKHPPAVVFATAYDQYALKAFEVDALDYL    100
                     ||||:||||||||||||||.:|..|||:|||||:||||||||||.|||||
BPUM_2535___l     51 LFLDIDLSGENGFDIAKRLNRMSDPPAIVFATAFDQYALKAFEVSALDYL    100

BSNT_04219___    101 TKPFDEERIQQTLKKYKKVNRDIVETEQNSHAG-----QHKLALSVGESI    145
                     ||||||||:.||::|:||...  |||:.:..:.     |.|||:||.:||
BPUM_2535___l    101 TKPFDEERLLQTIQKFKKWKS--VETQDHQLSDEKIPHQQKLAISVDDSI    148

BSNT_04219___    146 VIVDTKDIIYAGTEDGHVNVKTFDHSYTVSDTLVVIEKKLPDADFIRVHR    195
                     ||:..::|:|.|..:|...|||.||.|.|::.|||||||||:|.|:||||
BPUM_2535___l    149 VILQVEEIMYVGLSEGKKVVKTKDHMYEVTEPLVVIEKKLPEAYFMRVHR    198

BSNT_04219___    196 SFVVNTEYIKEIQPWFNSTYNLIMKDGSKIPVSRTYAKELKKLLHI-    241
                     |::|||.::||:||||||||||.|.|||.|||||||||||||.|.: 
BPUM_2535___l    199 SYIVNTSHMKEVQPWFNSTYNLHMTDGSIIPVSRTYAKELKKSLLLE    245


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