Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04168 and BPUM_2513

See DNA alignment / Visit BSNT_04168 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:41
# Commandline: needle
#    -asequence pep-align/BSNT_04168___lcfA.1.24716.seq
#    -bsequence pep-align/BPUM_2513___lcfA2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04168___lcfA-BPUM_2513___lcfA2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04168___lcfA-BPUM_2513___lcfA2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04168___lcfA
# 2: BPUM_2513___lcfA2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 574
# Identity:     382/574 (66.6%)
# Similarity:   452/574 (78.7%)
# Gaps:          15/574 ( 2.6%)
# Score: 2057.0
# 
#
#=======================================

BSNT_04168___      1 MQSQKPWLAEYPNDIPHELPLPNKTLQSILTDSAARFPDKTAISFYGKKL     50
                     |||.|.||..|||.|||||.:||:||||.|..||...|:.|||.|.||.:
BPUM_2513___l      1 MQSDKRWLLHYPNQIPHELTIPNETLQSYLFSSAEAAPEHTAIHFLGKNI     50

BSNT_04168___     51 TFHDILTDALKLAAFLQGNGLQKGDRVAVMLPNCPQTVISYYGVLFAGGI    100
                     |:..:..|.||||..|...|::||||||:|||||||:|||||.||.||||
BPUM_2513___l     51 TYEQLQEDVLKLANHLIKIGVKKGDRVAIMLPNCPQSVISYYAVLIAGGI    100

BSNT_04168___    101 VVQTNPLYTEHELEYQLRDAQVSVIITLDLLFPKAIKMKTLSIVDQILIT    150
                     ||||||||||.|||||:.|:...|:||||||:|||.|||.|:.::..:||
BPUM_2513___l    101 VVQTNPLYTEKELEYQMEDSGAKVLITLDLLYPKAYKMKALTSMEHFIIT    150

BSNT_04168___    151 SVKDYLPFPKNILYPLTQ--KQKVHIDFDKTANIHTFASSMKQEKTELLT    198
                     .::||||||||||:|:.|  |.|:.|..::...||.||..||:.:.| ..
BPUM_2513___l    151 KLQDYLPFPKNILFPIVQRRKNKMVIQVERNETIHHFAQIMKELEGE-QQ    199

BSNT_04168___    199 IPKI--DPEHDIAVLQYTGGTTGAPKGVMLTHQNILANTEMCAAWMYDVK    246
                     ||.:  ||:.|||||||||||||.||||||||:||||||||||:|||...
BPUM_2513___l    200 IPALSFDPKEDIAVLQYTGGTTGLPKGVMLTHENILANTEMCASWMYKTN    249

BSNT_04168___    247 EGAEKVLGIVPFFHVYGLTAVMNYSIKLGFEMILLPKFDPLETLKIIDKH    296
                     .|.|::|||:|||||||:|.|:|.::|.|.:|||||:||..:|||.|:|.
BPUM_2513___l    250 RGKERILGIIPFFHVYGMTTVLNLAVKEGHQMILLPRFDVADTLKTIEKQ    299

BSNT_04168___    297 KPTLFPGAPTIYIGLLHHPELQHYDLSSIKSCLSGSAALPVEVKQKFEKV    346
                     ||||||||||:||.||:||.::.||||||.:||||||||||||||.|||:
BPUM_2513___l    300 KPTLFPGAPTMYIALLNHPNIEKYDLSSITACLSGSAALPVEVKQSFEKL    349

BSNT_04168___    347 TGGKLVEGYGLSEASPVTHANFIWGKNKPGSIGCPWPSTDAAIYSEETGE    396
                     |||:|||||||||.|||||:||:||.||.||||||||:|||.||.||||.
BPUM_2513___l    350 TGGRLVEGYGLSETSPVTHSNFLWGANKTGSIGCPWPNTDAGIYCEETGG    399

BSNT_04168___    397 LAAPYEHGEIIVKGPQVMKGYWNKPEETAAVLRDGWLFTGDMGYMDEEGF    446
                     |..|||||||||||||:||||||:||||.|||||||.||||:|||||:||
BPUM_2513___l    400 LKEPYEHGEIIVKGPQIMKGYWNQPEETEAVLRDGWFFTGDIGYMDEDGF    449

BSNT_04168___    447 FYIADRKKDIIIAGGYNIYPREVEEALYEHEAIQEIVVAGVPDSYRGETV    496
                     |||.|||||:|||.|||||||||||||||||.:||:||||:||.||||||
BPUM_2513___l    450 FYIVDRKKDVIIASGYNIYPREVEEALYEHELVQEVVVAGIPDPYRGETV    499

BSNT_04168___    497 KAFVVLKKGAKADAEELDAFARSRLAPYKVPKAYDFRKELPKTAVGKILR    546
                     |||:|.||.|....:|||.|.|:|:|.:|||:.|:|::.|||||||||||
BPUM_2513___l    500 KAFIVPKKNAYLTEDELDRFVRTRIASFKVPRVYEFKESLPKTAVGKILR    549

BSNT_04168___    547 RRLLEEETENHHIK----------    560
                     |.|:|||...|...          
BPUM_2513___l    550 RVLIEEEKRKHASSAETPADQPKT    573


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