Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04080 and BPUM_2449

See DNA alignment / Visit BSNT_04080 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:35
# Commandline: needle
#    -asequence pep-align/BSNT_04080___valS.1.24716.seq
#    -bsequence pep-align/BPUM_2449___valS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04080___valS-BPUM_2449___valS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04080___valS-BPUM_2449___valS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04080___valS
# 2: BPUM_2449___valS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 880
# Identity:     777/880 (88.3%)
# Similarity:   837/880 (95.1%)
# Gaps:           0/880 ( 0.0%)
# Score: 4228.0
# 
#
#=======================================

BSNT_04080___      1 METNEQTMPTKYDPAAVEKDRYDFWLKGKFFEAGSDQTKEPYSVVIPPPN     50
                     ||||.|.|||||||.|:|||||.:||:||||||.:|:||:||:|||||||
BPUM_2449___v      1 METNNQEMPTKYDPNAIEKDRYTYWLEGKFFEAQNDKTKDPYTVVIPPPN     50

BSNT_04080___     51 VTGRLHLGHAWDTTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAK    100
                     |||:||||||||:|||||||||||||||||||||||||||||||||||||
BPUM_2449___v     51 VTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAK    100

BSNT_04080___    101 LREEGKSRYDLGREKFLEETWKWKEEYADFIRSQWAKLGLGLDYSRERFT    150
                     |||||.||||||||||:||||||||||||||||||||:||||||||||||
BPUM_2449___v    101 LREEGVSRYDLGREKFVEETWKWKEEYADFIRSQWAKMGLGLDYSRERFT    150

BSNT_04080___    151 LDEGLSKAVREVFVKLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQ    200
                     |||||:||||:|||:|||||||||||||||||||||||||||||||||||
BPUM_2449___v    151 LDEGLNKAVRQVFVQLYEKGLIYRGEYIINWDPATKTALSDIEVIYKDVQ    200

BSNT_04080___    201 GAFYHMSYPLADGSGSIEIATTRPETMLGDTAVAVHPEDERYKHLIGKTV    250
                     |||||:.|||:||:|||||||||||||||||||||||:||||:|||||||
BPUM_2449___v    201 GAFYHLRYPLSDGTGSIEIATTRPETMLGDTAVAVHPDDERYQHLIGKTV    250

BSNT_04080___    251 ILPIVNREIPIVGDDYVDMEFGSGAVKITPAHDPNDFELGNRHNLERILV    300
                     :|||..||||||.||||||||||||||||||||||||||||||:||||||
BPUM_2449___v    251 VLPITGREIPIVADDYVDMEFGSGAVKITPAHDPNDFELGNRHDLERILV    300

BSNT_04080___    301 MNEDGTMNENALQYQGMDRFECRKKLVKDLQEAGVLFKIEDHMHSVGHSE    350
                     ||||||||.|||||:.||||||||:|||||||.|:|||||||||||||||
BPUM_2449___v    301 MNEDGTMNANALQYKEMDRFECRKQLVKDLQEEGILFKIEDHMHSVGHSE    350

BSNT_04080___    351 RSGAVVEPYLSTQWFVRMQPLADAAIELQKKEEKVNFVPDRFEKTYLHWM    400
                     ||||||||||||||||:||||||.||.||..:::|.||||||||||||||
BPUM_2449___v    351 RSGAVVEPYLSTQWFVKMQPLADEAINLQNGDDQVQFVPDRFEKTYLHWM    400

BSNT_04080___    401 ENIRDWCISRQLWWGHRIPAWYHKETGELYVGLEAPEDSENWEQDTDVLD    450
                     ||||||||||||||||||||||||||.|:|||||||||.||||||.||||
BPUM_2449___v    401 ENIRDWCISRQLWWGHRIPAWYHKETKEVYVGLEAPEDIENWEQDNDVLD    450

BSNT_04080___    451 TWFSSALWPFSTMGWPDVTAEDFKRYYPTDVLVTGYDIIFFWVSRMIFQG    500
                     |||||||||||||||||..:|||||||||::|||||||||||||||||||
BPUM_2449___v    451 TWFSSALWPFSTMGWPDAESEDFKRYYPTNLLVTGYDIIFFWVSRMIFQG    500

BSNT_04080___    501 IEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVIDKYGADSLRY    550
                     :|||||:||||||||||||||||||||||||||:|||:||||||||||||
BPUM_2449___v    501 LEFTGEKPFKDVLIHGLIRDEQGRKMSKSLGNGIDPMEVIDKYGADSLRY    550

BSNT_04080___    551 FLATGSSPGQDLRFSYEKVESTWNFANKIWNASRFALMNMDGMTYDELDL    600
                     |||||||||||||||:||||||||||||||||||||||||||:|||||||
BPUM_2449___v    551 FLATGSSPGQDLRFSFEKVESTWNFANKIWNASRFALMNMDGLTYDELDL    600

BSNT_04080___    601 SGEKSVADKWILTRLNETIEHVTQLADRYEFGEVGRHLYNFIWDDFCDWY    650
                     .|||||||:|||||||||||.||||||:||||||||||||||||||||||
BPUM_2449___v    601 IGEKSVADQWILTRLNETIESVTQLADKYEFGEVGRHLYNFIWDDFCDWY    650

BSNT_04080___    651 IEMAKLPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLP    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2449___v    651 IEMAKLPLYGEDEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLP    700

BSNT_04080___    701 HQGESITVSQWPVVVPEHTDTEATADMKLLVELIRSVRNIRSEVNTPMSK    750
                     |:||||||:.||.|.||.::.:|:||||||||||||||||||||||||||
BPUM_2449___v    701 HEGESITVAAWPEVKPELSNEQASADMKLLVELIRSVRNIRSEVNTPMSK    750

BSNT_04080___    751 QVELYIKTSTDEIAARLEANRSYVERFTNPSVLKIGTDIEAVDKAMTAVV    800
                     |||||||.||.::..|||.||||:|||||||||:||||:.|.|||||||:
BPUM_2449___v    751 QVELYIKASTSDVQERLEKNRSYIERFTNPSVLEIGTDVPASDKAMTAVI    800

BSNT_04080___    801 SGAEVILPLEGLINIDEEIARLQKEFDKLTKEVERVQKKLGNEGFMKKAP    850
                     ||||:|||||||||:||||||||||.||||||||||||||||||||||||
BPUM_2449___v    801 SGAELILPLEGLINLDEEIARLQKELDKLTKEVERVQKKLGNEGFMKKAP    850

BSNT_04080___    851 AHVIDEEREKEKDYMAKRDAVQKRMAELKG    880
                     ..|::|||.||:||:|||:|||||:.|||.
BPUM_2449___v    851 ESVVEEERAKERDYVAKREAVQKRIEELKA    880


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04080 and BPUM_2449

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
