Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04077 and BPUM_2447
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence pep-align/BSNT_04077.1.24716.seq
# -bsequence pep-align/BPUM_2447.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04077-BPUM_2447.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04077-BPUM_2447.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04077
# 2: BPUM_2447
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity: 54/249 (21.7%)
# Similarity: 83/249 (33.3%)
# Gaps: 81/249 (32.5%)
# Score: 222.0
#
#
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BSNT_04077 0 -------------------------------------------------- 0
BPUM_2447 1 MIEIFLFLAGITMGSFFHLVGERLPVKRSILIPRSHCTACKQPLSLREMI 50
BSNT_04077 1 ---------------------MYPAAELVTACLFAAAGIRFGTSLELFPA 29
:||..||::..||.......|.|.|....
BPUM_2447 51 PLVSYLVWKGSCKHCGIRLSWLYPTIELLSGGLFLFIYRIAGFSFEGLFL 100
BSNT_04077 30 VVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLG 79
::..||.:|..|:|:.:|.:||.:.:||.|..|..|.:.||..|:.|...
BPUM_2447 101 MILCSLFVIAVVSDLLYMRVPNELFLFFFPLFAIYRTLEPLLIWWEGTAS 150
BSNT_04077 80 AAAGFLFLAVIAAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIG 129
.....|..:.:.......:||.|:|:|:|:.|..|.|......|.|.:.|
BPUM_2447 151 LIFCILLFSSLDYFKPNSMGGADMKMFSVLAFCFGFKPFLLMLFLSCITG 200
BSNT_04077 130 ALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIISFYIKMALG 178
.:| |.|.:.|| .:|.||.|:||. |...||.|..::..:.
BPUM_2447 201 MVY--AKVFSFRL--NEPFPFVPSIAI-SFFLYLCGTPVLFQFG----- 239
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