Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04044 and BPUM_2424
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_04044___safA.1.24716.seq
# -bsequence pep-align/BPUM_2424___safA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04044___safA-BPUM_2424___safA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04044___safA-BPUM_2424___safA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04044___safA
# 2: BPUM_2424___safA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 481
# Identity: 181/481 (37.6%)
# Similarity: 230/481 (47.8%)
# Gaps: 161/481 (33.5%)
# Score: 760.5
#
#
#=======================================
BSNT_04044___ 1 MKIHIVQKGDSLWKIAEKYGVDVEEVKKLNTQLSNPDLIMPGMKIKVPSE 50
|||||||||||||||::|||||.:|:||||:|||||||||||||||:||.
BPUM_2424___s 1 MKIHIVQKGDSLWKISKKYGVDFQELKKLNSQLSNPDLIMPGMKIKIPSS 50
BSNT_04044___ 51 GVPVRKE-PKAGKSPAAGSVKQEHPYAKEKPKSVVDVEDTKPKEK--KSM 97
||||:.: .||.:.|. .:||||.|||||.||.|:||||||| :.:
BPUM_2424___s 51 GVPVKTDHQKAKEMPK----PKEHPYVKEKPKDVVQVQDTKPKEKPNEPV 96
BSNT_04044___ 98 PYVPPMPNLQENVYPEADVNDYYDMKQLFQPWSPPKPEEPKKHHDGNMDH 147
|||||:|.:::.|:|:.||| || ...|:||::|| |||.|....||
BPUM_2424___s 97 PYVPPVPKIEQPVFPQVDVN-YY-QTNLYQPFTPP----PKKEHHEKKDH 140
BSNT_04044___ 148 MY---------------------------------------HMQDQFP-- 156
:: |::|:..
BPUM_2424___s 141 VHEKKDHVHDKKDHKDHVHYENKEHKDHKDHKDHFHHENKGHLKDEVAKG 190
BSNT_04044___ 157 ---------QQEAMSNMENANYPNMPNMPKAPEVGGVE----EENVHHTV 193
|:|...:||::||||:||.|:.|.|||.. .||..|..
BPUM_2424___s 191 YDPFIHIPHQKEEGKDMEHSNYPNLPNFPQMPNVGGAAVGGMAENKEHHH 240
BSNT_04044___ 194 PNMPMPAVQPYYHYPAHFVPC-------PVPVSPIFPGSGLCYPYYP--- 233
.:....|..|||.| .|::|. .||.|||.||||||||..|
BPUM_2424___s 241 HHQHHDAYDPYYGY-GHYMPAMYPYPQQMVPASPILPGSGLCYPVQPYYH 289
BSNT_04044___ 234 --AQAYPMHPMHGYQPGFVSPQYDPGYENQHHEN-SHHGHY--------- 271
...|| :|...|.|.:.:|.| .|...:||.| .||.|:
BPUM_2424___s 290 HHMMPYP-YPAQPYYPAYQAPAY-YGEHYEHHANDGHHWHHHMHPNANAN 337
BSNT_04044___ 272 ---------GSYGAPQYASPAYGSPYGHMPYGPYYGTPQVMGAYQPAAAH 312
|.| |..::.|||.
BPUM_2424___s 338 ANVNANVNQGFY--PNVSNEAYGK-------------------------- 359
BSNT_04044___ 313 GYMPYKDHDDCGCDG---DHQPYFSAPGHSGMGAYGSPNMPYGTANPNP- 358
:|||||. .|||: ||| |.:| :|||.....|
BPUM_2424___s 360 --------EDCGCDDGMKQHQPW---PGH-----YPNP-VPYGQMGAYPA 392
BSNT_04044___ 359 NPYSAGVSMPMTNQPSVNQ-MFGRPEEENE- 387
.||. ||...| :|.||||:.|
BPUM_2424___s 393 QPYM---------QPYPGQSVFARPEEDEEE 414
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