Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04002 and BPUM_2399
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence pep-align/BSNT_04002___yrvJ.1.24716.seq
# -bsequence pep-align/BPUM_2399___blyA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04002___yrvJ-BPUM_2399___blyA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04002___yrvJ-BPUM_2399___blyA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04002___yrvJ
# 2: BPUM_2399___blyA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 571
# Identity: 305/571 (53.4%)
# Similarity: 385/571 (67.4%)
# Gaps: 79/571 (13.8%)
# Score: 1594.0
#
#
#=======================================
BSNT_04002___ 1 MHTFLIVFTLSINKSFYFYLKIRKDFTILNKNAFLMIIRKEDTMNKKYFV 50
BPUM_2399___b 0 -------------------------------------------------- 0
BSNT_04002___ 51 LIVCIIFTAALFPTFSSVTAAQGEAVIATDETNVRSGPGLSYGITAEVKK 100
.:..||...:||:||||.||||||||||||.|.||:
BPUM_2399___b 1 --------------MAHATAQTDQAVVATDEINVRSGPGLSYGIAAVVKR 36
BSNT_04002___ 101 GERYPILKEDGDWVQIQLGSGEKGWVVSWLIT---------KEDQASTSS 141
||.||||.:.|:||||.|.:|:|||||||||| |....:.||
BPUM_2399___b 37 GESYPILTKQGEWVQIGLSNGQKGWVVSWLITTSSGSQKAAKSKTQNQSS 86
BSNT_04002___ 142 SGSSDTVTSTDPDLRMRSGPGTSYEVIGKFPQGSQASVIDKDSGWIKISY 191
|||| ::|||..|||:|:||||||:|:|.||||:.|..:.....|.||||
BPUM_2399___b 87 SGSS-SITSTATDLRIRTGPGTSYQVVGTFPQGASAKKLQTSGEWTKISY 135
BSNT_04002___ 192 HSATGWVSSEYVTSGGSSSASDESDQTEDSGASTTGTVGVSSLNVRASAS 241
..|.|||.|:||:.|..:| :|...|.|.:..||||||||||||.||:
BPUM_2399___b 136 KQAVGWVHSDYVSGGQKAS---QSSSGESSRSKQTGTVGVSSLNVRQSAA 182
BSNT_04002___ 242 HDAAIITKLDRGTKLTVLNEKNGWAHIEVNGLKGWVASHYLLTSS-VPAD 290
.:|.|:..|.|.|::|:|.|:|||..||..|:|||.||:|::||: ..:.
BPUM_2399___b 183 PNAQIVASLARNTQVTILREQNGWYEIEAKGVKGWAASYYIVTSNGASSA 232
BSNT_04002___ 291 DSANAGSSSSAKKAYIMYGGTNLRSDASTSASIVERAAKGDSYTITGSKG 340
...|:.||:|.|||||:|.|||:|..|||||.|.|||.||.:|.|..::|
BPUM_2399___b 233 GEKNSSSSTSQKKAYIVYDGTNIRKSASTSAQIAERATKGAAYQIVRTQG 282
BSNT_04002___ 341 SWYEIKLDNGQTAYVANWVVQTSKSAEEAGEPPVSDSPSGNGSLNNKTII 390
.|||:.|.||.|.|||:|||||:|::.||..|. .||.||.|||..|||:
BPUM_2399___b 283 DWYEVTLSNGGTGYVASWVVQTNKNSSEAPRPQ-QDSSSGTGSLKGKTIV 331
BSNT_04002___ 391 VDPGHGGKDSGTIGYSGKFEKNLTIKTAKLLASKLRSAGADVYVTRQDDT 440
:|||||||||||||..|.||||:|||||.|||.|||::||:||:||.:||
BPUM_2399___b 332 LDPGHGGKDSGTIGADGAFEKNITIKTANLLAGKLRASGANVYLTRSEDT 381
BSNT_04002___ 441 FVSLQSRVSTSHYRNADAFISIHYDSYADTSTRGSTAYYYSPAKDQELAS 490
|:||||||:||||||||||||:||||:.|.|.||||||||..:|||:||:
BPUM_2399___b 382 FISLQSRVATSHYRNADAFISLHYDSFMDPSVRGSTAYYYQASKDQQLAT 431
BSNT_04002___ 491 DVHSEVVKRSSIPDRGVLFGDYYVLRENRQPAMLYELGYVSHPQEEAIVH 540
:||:||.|||.|||:||.||||:|||||::|::||||||:|:||||||::
BPUM_2399___b 432 NVHTEVAKRSQIPDKGVKFGDYFVLRENKRPSLLYELGYLSNPQEEAIIY 481
BSNT_04002___ 541 SNSYQEKVTDGIESGLEKYFQ 561
|.||||:||:|:..||::||:
BPUM_2399___b 482 SASYQERVTEGMTEGLKQYFR 502
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