Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03977 and BPUM_2380

See DNA alignment / Visit BSNT_03977 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:28
# Commandline: needle
#    -asequence pep-align/BSNT_03977___alaS.1.24716.seq
#    -bsequence pep-align/BPUM_2380___alaS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03977___alaS-BPUM_2380___alaS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03977___alaS-BPUM_2380___alaS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03977___alaS
# 2: BPUM_2380___alaS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 878
# Identity:     741/878 (84.4%)
# Similarity:   808/878 (92.0%)
# Gaps:           0/878 ( 0.0%)
# Score: 3891.0
# 
#
#=======================================

BSNT_03977___      1 MKHLTSAEVRQMFLDFFKEKGHAVEPSASLVPHEDPSLLWINSGVATLKK     50
                     ||.||||:|||||||||||||||||||||||||:||:|||||||||||||
BPUM_2380___a      1 MKTLTSAQVRQMFLDFFKEKGHAVEPSASLVPHDDPTLLWINSGVATLKK     50

BSNT_03977___     51 YFDGRVVPENPRIVNAQKAIRTNDIENVGKTARHHTFFEMLGNFSIGDYF    100
                     ||||||||:||||.||||:|||||||||||||||||||||||||||||||
BPUM_2380___a     51 YFDGRVVPDNPRICNAQKSIRTNDIENVGKTARHHTFFEMLGNFSIGDYF    100

BSNT_03977___    101 KEEAITWAWEFLTSDKWIGFDKELLSVTVHPEDEEAYEFWAKKIGIPEER    150
                     |||||.|||||||||:|||||..||||||||||||||..|..|||:||||
BPUM_2380___a    101 KEEAIEWAWEFLTSDEWIGFDPNLLSVTVHPEDEEAYVLWRDKIGVPEER    150

BSNT_03977___    151 IIRLEGNFWDIGEGPSGPNTEIFYDRGEAYGNDPEDPELYPGGENDRYLE    200
                     ||||||||||||||||||||||||||||:||:|..||||||||||:||||
BPUM_2380___a    151 IIRLEGNFWDIGEGPSGPNTEIFYDRGESYGHDMNDPELYPGGENERYLE    200

BSNT_03977___    201 VWNLVFSEFNHNPDGTYTPLPKKNIDTGMGLERMVSVIQNVPTNFDTDLF    250
                     |||||||||||||||:||||||||||||||||||||||||||||||||||
BPUM_2380___a    201 VWNLVFSEFNHNPDGSYTPLPKKNIDTGMGLERMVSVIQNVPTNFDTDLF    250

BSNT_03977___    251 VPIIKATESISGETYGKDNVKDTAFKVIADHIRTVAFAVSDGALPSNEGR    300
                     :|||:|.|:||||:||:...||||||||||||||||||||||||||||||
BPUM_2380___a    251 MPIIRAVETISGESYGETKEKDTAFKVIADHIRTVAFAVSDGALPSNEGR    300

BSNT_03977___    301 GYVLRRLLRRAVRYAKTINIHRPFMFDLVPVVAEIMADFYPEVKEKADFI    350
                     ||||||||||||||||||:|||||||||||||||||.||||:|:.|.:||
BPUM_2380___a    301 GYVLRRLLRRAVRYAKTIHIHRPFMFDLVPVVAEIMKDFYPDVQAKEEFI    350

BSNT_03977___    351 AKVIKTEEERFHETLNEGLAILSEMIKKEKDKGSSVISGADVFKLYDTYG    400
                     |||||.||||||||||||||||||:||||:|||||.|||.||||||||||
BPUM_2380___a    351 AKVIKNEEERFHETLNEGLAILSEVIKKERDKGSSQISGEDVFKLYDTYG    400

BSNT_03977___    401 FPVELTEEYAEDENMTVDHEGFEEEMNQQRERARNARQDVGSMQVQGGAL    450
                     |||||||||||||:||||.|||:.||.:||||||||||||||||||||||
BPUM_2380___a    401 FPVELTEEYAEDEHMTVDREGFQAEMEKQRERARNARQDVGSMQVQGGAL    450

BSNT_03977___    451 RDVTDESTFVGYSQTKADANIIVLLQDGQLIEEAYEGESVQIILDETPFY    500
                     .|:..|||||||....|.|::|.|||:|:::.||:||::|||:|||||||
BPUM_2380___a    451 GDIKVESTFVGYENLTAVAHMIELLQNGEIVSEAHEGDTVQILLDETPFY    500

BSNT_03977___    501 AESGGQIGDKGYLRSEQAVVRIKDVQKAPNGQHVHEGVVESGTVQKGLHV    550
                     ||||||:.|||.|:|.:.::.||||:|||||||||||||.|||.:|||.|
BPUM_2380___a    501 AESGGQVADKGTLKSAEVIIDIKDVKKAPNGQHVHEGVVVSGTAKKGLVV    550

BSNT_03977___    551 TAEVEDHMRSGVIKNHTATHLLHQALKDVLGTHVNQAGSLVTENRLRFDF    600
                     |||||..:|.|::||||||||||||||||||:|||||||||.||||||||
BPUM_2380___a    551 TAEVESALRKGIVKNHTATHLLHQALKDVLGSHVNQAGSLVNENRLRFDF    600

BSNT_03977___    601 SHFGQVTKEELEQIERIVNEKIWASIPVSIDLKPIAEAKEMGAMALFGEK    650
                     |||||||||||.|||:|||||||..|.|:|||||||||||||||||||||
BPUM_2380___a    601 SHFGQVTKEELSQIEKIVNEKIWEGISVAIDLKPIAEAKEMGAMALFGEK    650

BSNT_03977___    651 YGDIVRVVQVGDYSLELCGGCHVRNTAEIGLFKIVSESGIGAGTRRIEAV    700
                     ||||||||||||||:||||||||:||||||||||.|||||||||||||||
BPUM_2380___a    651 YGDIVRVVQVGDYSIELCGGCHVQNTAEIGLFKIASESGIGAGTRRIEAV    700

BSNT_03977___    701 TGQGAYVEMNSQISVLKQTADELKTNIKEVPKRVAALQAELKEAQRENES    750
                     ||:|||.|:|.|:.:|:|.|.|||:|.|:||||:|:|||:|||.||||||
BPUM_2380___a    701 TGKGAYEELNDQLGILEQAASELKSNTKDVPKRIASLQADLKEVQRENES    750

BSNT_03977___    751 LLAKLGNVEAGAILSKVKEVDGVNVLAAKVNAKDMNHLRTMVDELKAKLG    800
                     |||||...|||:||.||.|:.||.||..|||||||||||||||:||||||
BPUM_2380___a    751 LLAKLSQAEAGSILEKVTEIGGVKVLTEKVNAKDMNHLRTMVDDLKAKLG    800

BSNT_03977___    801 SAVIVLGAVQNDKVNISAGVTKDLIEKGLHAGKLVKQAAEVCGGGGGGRP    850
                     |||||||||||.|||||||||||:||||||||||||||||:|||||||||
BPUM_2380___a    801 SAVIVLGAVQNGKVNISAGVTKDVIEKGLHAGKLVKQAAEICGGGGGGRP    850

BSNT_03977___    851 DMAQAGGKQPEKLEEALASVEDWVKSVL    878
                     |||||||||||||||||.|||:.|||||
BPUM_2380___a    851 DMAQAGGKQPEKLEEALTSVEESVKSVL    878


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03977 and BPUM_2380

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
