Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05138 and BPUM_2330

See DNA alignment / Visit BSNT_05138 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:47
# Commandline: needle
#    -asequence pep-align/BSNT_05138___araR.1.24716.seq
#    -bsequence pep-align/BPUM_2330.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05138___araR-BPUM_2330.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05138___araR-BPUM_2330.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05138___araR
# 2: BPUM_2330
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 368
# Identity:     168/368 (45.7%)
# Similarity:   243/368 (66.0%)
# Gaps:           8/368 ( 2.2%)
# Score: 789.0
# 
#
#=======================================

BSNT_05138___      1 MLPKYAQVKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIRKAIGD     50
                     |..||..:.::|.|.|..|.....::||||:.|.:.:.|||||:||||.:
BPUM_2330          1 MKKKYQIIIDDIKSKILTGDYRIGERIPTESSLQEMYQVSRHTVRKAILE     50

BSNT_05138___     51 LVSQGLLYSVQGGGTFVASR-SAKSALHSN-KTIGVLTTYISDYIFPSII     98
                     |.|:|.|.|.:|.||||.:: ..|.|.|:: |||||:|||||||||||||
BPUM_2330         51 LSSEGFLRSEKGSGTFVTNQYQTKPAGHAHMKTIGVITTYISDYIFPSII    100

BSNT_05138___     99 RGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSAL    148
                     |||||.|:|:.||:||.||||:.|.|::.||.:||..:||||||||||.|
BPUM_2330        101 RGIESRLNEENYSLLLASTNNDVDQEKKALEMMLSFGVDGLIVEPTKSNL    150

BSNT_05138___    149 QTPNIGYYLNLEKNGIPFAMINASYAELAAPSFTLDDVKGGMMAAEHLLS    198
                     ..|||.|||:.::..:|..||||.|.:|..|...|||||...:|.:.|::
BPUM_2330        151 YNPNISYYLSFKEQDVPLIMINAYYEQLEVPFLCLDDVKSSYLATKELIT    200

BSNT_05138___    199 LGHTHMMGIFKADDTQGVKRMNGFIQAHRERELFPSPDMIVTFTTEEKES    248
                     .||..:..|.|.||.||..||.|:|||..|.:|...|:.::.|.||.|: 
BPUM_2330        201 SGHQQIGLISKTDDLQGKYRMKGYIQALGEAKLNFLPEHVLFFDTESKQ-    249

BSNT_05138___    249 KLLEKVKATLEKNSKHMPTAILCYNDEIALKVIDMLREMDLKVPEDMSIV    298
                     .|.:.:|..|.|: :|..||::|||||:.|:|.::..::.|.:|||:||:
BPUM_2330        250 HLGDDIKTFLLKH-QHELTALVCYNDEVGLEVANVCSDIGLSIPEDLSII    298

BSNT_05138___    299 GYDDSHFAQ-ISEVKLTSVKHPKSVLGKAAAKYVIDCLEHKKPKQEDVIF    347
                     |.|:|:.|| .:.||||::.||:..:|:.||.::|..::.||.......:
BPUM_2330        299 GQDNSYIAQKNANVKLTTLTHPQEQMGRDAADWMIKKVQGKKNLPHQTFY    348

BSNT_05138___    348 EPELIIRQSARKLNE---    362
                     ||||:..::.:::|.   
BPUM_2330        349 EPELVPGETIKQMNARKK    366


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