Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04202 and BPUM_2327
See
DNA alignment /
Visit
BSNT_04202 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:43
# Commandline: needle
# -asequence pep-align/BSNT_04202___araA.1.24716.seq
# -bsequence pep-align/BPUM_2327___araA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04202___araA-BPUM_2327___araA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04202___araA-BPUM_2327___araA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04202___araA
# 2: BPUM_2327___araA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity: 249/498 (50.0%)
# Similarity: 331/498 (66.5%)
# Gaps: 27/498 ( 5.4%)
# Score: 1316.5
#
#
#=======================================
BSNT_04202___ 1 MLQTKDYEFWFVTGSQHLYGEETLELVDQHAKSICEGL--SGISSRYKIT 48
||.::..|.||:.|||||||:|.|:.|...|:.:.:.| ||:.. |.:.
BPUM_2327___a 1 MLTSQHKECWFIVGSQHLYGDEALQKVKADAQKMTDALNESGLLP-YPVI 49
BSNT_04202___ 49 HKPVVTSPETIRELLREAEYSETCAGIITWMHTFSPAKMWIEGLSSYQKP 98
.:.:..|.:.|.:|::|..|.:...|::|||||||||||||.|.:..|||
BPUM_2327___a 50 LQELAVSADQITKLMKEVNYRDEVVGVMTWMHTFSPAKMWIRGTNLLQKP 99
BSNT_04202___ 99 LMHLHTQYNRDIPWGTIDMDFMNSNQSAHGDREYGYINSRMGLSRKVIAG 148
|:||.|||...|||.|||||:||.:|||||||||||||:|:....:::||
BPUM_2327___a 100 LLHLVTQYYEKIPWDTIDMDYMNLHQSAHGDREYGYINARLNKQNQIVAG 149
BSNT_04202___ 149 YWDDEEVKKEMSQWMDTAAALNESRHIKVARFGDNMRHVAVTDGDKVGAH 198
:|...||:::::.|||.|||.:||..||||||||||||||||:|||:.|.
BPUM_2327___a 150 HWSKPEVQQQIADWMDVAAAYHESFQIKVARFGDNMRHVAVTEGDKIEAQ 199
BSNT_04202___ 199 IQFGWQVDGYGIGDLVEVMDRITDDEVDTLYAEYDRLYVISEETKRDEAK 248
||.||.||.:|||||||.::.:.:.|||.|:|||...|.:...|...|..
BPUM_2327___a 200 IQLGWTVDYFGIGDLVEYVNAVEEAEVDALFAEYLLQYDVEYGTYSVEDW 249
BSNT_04202___ 249 VASIKEQAKIELGLTAFLEQGGYTAFTTSFEVLHGMKQLPGLAVQRLMEK 298
..|:|.||:.|:.:..||::|||.||||:||.||||||||||||||||.|
BPUM_2327___a 250 EKSVKVQARYEIAIQRFLDEGGYNAFTTNFEDLHGMKQLPGLAVQRLMAK 299
BSNT_04202___ 299 GYGFAGEGDWKTAALVRMMKIMAKGKRTSFMEDYTYHFEPGNEMILGSHM 348
|||||||||||||||.|::|:|:..:.|.|||||||....|.|.:|.|||
BPUM_2327___a 300 GYGFAGEGDWKTAALDRLLKVMSHHQSTGFMEDYTYEMTSGQEAVLQSHM 349
BSNT_04202___ 349 LEVCPTVALDQPKIEVHPLSIGGKEDPARFVFNGISGSAIQASIVDIGGR 398
|||.|.:|..:|.|.|.||.||.:|||||.||:|.:|..:..||.|.|..
BPUM_2327___a 350 LEVDPALAHTKPVIVVSPLGIGNREDPARLVFDGKAGEGVVVSIADFGTH 399
BSNT_04202___ 399 FRLVLNEVTGQEIEKDMPNLPVARVLWKPEPSLKTAAEAWILAGGAHHTC 448
|:.::.||...|.|:..|:|||||||||.:|:.:...:|||..||.|||.
BPUM_2327___a 400 FKWLIQEVEAFEPEEAAPHLPVARVLWKIKPNFQDGVKAWIKQGGGHHTV 449
BSNT_04202___ 449 LSYELTAEQMLDWAEMAGIESVLISRDTTIHKLKHELKWNEALYRLQK 496
:|..|:.:|::.:|::...|.|::
BPUM_2327___a 450 VSLNLSVDQIVHFAKLVSAEYVVL------------------------ 473
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.