Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03814 and BPUM_2296

See DNA alignment / Visit BSNT_03814 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:22
# Commandline: needle
#    -asequence pep-align/BSNT_03814___yqeL.1.24716.seq
#    -bsequence pep-align/BPUM_2296.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03814___yqeL-BPUM_2296.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03814___yqeL-BPUM_2296.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03814___yqeL
# 2: BPUM_2296
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 118
# Identity:      93/118 (78.8%)
# Similarity:   105/118 (89.0%)
# Gaps:           0/118 ( 0.0%)
# Score: 503.0
# 
#
#=======================================

BSNT_03814___      1 MNQKSILKIAAAACDDKRAEDILALDMEGISLVADYFLICHGNSDKQVQA     50
                     |:..|||.:||.||||||||||:||:|:||||||||||||||||||||||
BPUM_2296          1 MDSSSILNVAAGACDDKRAEDIIALNMQGISLVADYFLICHGNSDKQVQA     50

BSNT_03814___     51 IAREIKDQADENGIQVKKMEGFDEARWVLVDLGDVIVHVFHKDERSYYNL    100
                     ||||:|..|:|:||:||||||||||||||:||||||.|||||:||.||||
BPUM_2296         51 IAREVKHLAEESGIEVKKMEGFDEARWVLIDLGDVIAHVFHKEERGYYNL    100

BSNT_03814___    101 EKLWGDAPLADLDLGMNQ    118
                     ||||||||...|.||:|.
BPUM_2296        101 EKLWGDAPRETLSLGINS    118


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