Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03793 and BPUM_2281
See
DNA alignment /
Visit
BSNT_03793 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:20
# Commandline: needle
# -asequence pep-align/BSNT_03793.1.24716.seq
# -bsequence pep-align/BPUM_2281___grpE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03793-BPUM_2281___grpE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03793-BPUM_2281___grpE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03793
# 2: BPUM_2281___grpE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 92/185 (49.7%)
# Similarity: 105/185 (56.8%)
# Gaps: 71/185 (38.4%)
# Score: 474.0
#
#
#=======================================
BSNT_03793 0 -------------------------------------------------- 0
BPUM_2281___g 1 MSEEKQTPEQEAEVEAQEEAVQADTEEVTQDEQSAFQEKIDELQQLLDEK 50
BSNT_03793 1 ---------------------MEASQKYRSQNIVTDLLPALDSFERALQV 29
:|..||||||::|:|||||||:|||||.:
BPUM_2281___g 51 ENKILRVQADFENYKRRARTEVETVQKYRSQHVVSDLLPALDNFERALGI 100
BSNT_03793 30 EADNEQTKSLLQGMEMVHRQLVEALKKEGVEAIEAVGQEFDPNLHQAVMQ 79
:.||||.||||:||:||:||||||||.||||.|||||:||||||||||||
BPUM_2281___g 101 DPDNEQAKSLLEGMQMVYRQLVEALKNEGVEPIEAVGKEFDPNLHQAVMQ 150
BSNT_03793 80 AEDENYGSNIVVEEMQKGYKLKDRVIRPSMVKVNQ 114
.||||:.|||||||:||||||||||||||||||||
BPUM_2281___g 151 VEDENFDSNIVVEELQKGYKLKDRVIRPSMVKVNQ 185
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.