Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03747 and BPUM_2247
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:17
# Commandline: needle
# -asequence pep-align/BSNT_03747___yqfR.1.24716.seq
# -bsequence pep-align/BPUM_2247___yqfR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03747___yqfR-BPUM_2247___yqfR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03747___yqfR-BPUM_2247___yqfR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03747___yqfR
# 2: BPUM_2247___yqfR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 329/450 (73.1%)
# Similarity: 381/450 (84.7%)
# Gaps: 14/450 ( 3.1%)
# Score: 1700.5
#
#
#=======================================
BSNT_03747___ 1 MCRFKELGKMKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKK 50
|.||||..||||.|||||:|.||||||||||||:||||||.
BPUM_2247___y 1 ---------MNETKFTTYELKSFIIDAIHELGFYEPTDIQKRIIPAVLKG 41
BSNT_03747___ 51 ESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAPTRELANQIYQE 100
|||||||||||||||||||||::.|||:|:.||||||||||||||||::|
BPUM_2247___y 42 ESVIGQSQTGTGKTHAYLLPLIHSIDPSKEHVQVVITAPTRELANQIFKE 91
BSNT_03747___ 101 A---LKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQPHLVVGTPGRIAD 147
| ||....|| :|::|.:||||||||||.|||.||||||||||||||
BPUM_2247___y 92 AQTILKNASPEE--EIKAKLYIGGTDKQKSIQKLKNQPHLVVGTPGRIAD 139
BSNT_03747___ 148 LIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPEDLQMLVFSA 197
||.||||:|:||.||||||||||||||||.|||.|||:|||.||||||||
BPUM_2247___y 140 LIHEQALNVYKATSLVIDEADLMLDMGFLEDVDRIGSQMPEQLQMLVFSA 189
BSNT_03747___ 198 TIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFD 247
||||||||||||||:||||||||||::||..|:|||:|||.|||.|||.:
BPUM_2247___y 190 TIPEKLKPFLKKYMDNPKYAHVEPKRITAENIQHILVPSKQRDKLKLLHE 239
BSNT_03747___ 248 IMSHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVM 297
:::::.|||||:|||||.|.|.||.:|..||||:|:||||||||||||||
BPUM_2247___y 240 MVTNVQPYLGIIFANTKTTVDEIASFLQEKGMKVGVLHGGLTPRERKKVM 289
BSNT_03747___ 298 KQINDLEFTYVIATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTAR 347
|||:||||||::|:|||||||||||||||||||||.||||||||||||||
BPUM_2247___y 290 KQIDDLEFTYIVASDLAARGIDIKGVSHVINYELPSDLDFYVHRVGRTAR 339
BSNT_03747___ 348 AGSSGQAMTIYELTDEDALVRLEKMGIEFDYLELEKGEWKKGDDRQRRKK 397
|||||.|||||||.|||||:::||||:.|:...:..|||:..|||.:|::
BPUM_2247___y 340 AGSSGIAMTIYELADEDALIQIEKMGVVFENKTIVHGEWRDADDRLKRQR 389
BSNT_03747___ 398 RKKTPNEADEIAHRLVKKPKKVKPGYKKKMSYEMEKIKKKQRRNQSKKRK 447
|||.|||.:|.|.|||:|||.|||||||||:.||:|||:::||...:..|
BPUM_2247___y 390 RKKAPNEIEEKAKRLVRKPKAVKPGYKKKMTREMDKIKRQERRKSKRNGK 439
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