Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03731 and BPUM_2227

See DNA alignment / Visit BSNT_03731 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence pep-align/BSNT_03731___pstS.1.24716.seq
#    -bsequence pep-align/BPUM_2227___pstS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03731___pstS-BPUM_2227___pstS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03731___pstS-BPUM_2227___pstS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03731___pstS
# 2: BPUM_2227___pstS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     238/306 (77.8%)
# Similarity:   267/306 (87.3%)
# Gaps:           7/306 ( 2.3%)
# Score: 1200.0
# 
#
#=======================================

BSNT_03731___      1 MKKNKL-VLMLLMAAFMMIAAACGN---AGESKKSNSDSAKGEEKASGSL     46
                     |||||| :|..|..|.:....||||   :|:||.|.. :|..:::||||:
BPUM_2227___p      1 MKKNKLWLLTFLTIALLAFVTACGNSSSSGDSKDSKG-NASNKDEASGSI     49

BSNT_03731___     47 TISGSSAMQPLVLAAAEKFMEENPDADIQVQAGGSGTGLSQVSEGAVQIG     96
                     ||||||||||||||||||||:::|.||||||||||||||||||||:||||
BPUM_2227___p     50 TISGSSAMQPLVLAAAEKFMDKHPKADIQVQAGGSGTGLSQVSEGSVQIG     99

BSNT_03731___     97 NSDVFAEEKEGIDAKALVDHQVAVVGMAAAVNPDAGVKDISKDELKKIFT    146
                     |||||||||:|||||||.||:||||||||||||:.|||||||||||||||
BPUM_2227___p    100 NSDVFAEEKDGIDAKALTDHKVAVVGMAAAVNPEVGVKDISKDELKKIFT    149

BSNT_03731___    147 GKIKNWKELGGKDQKITLVNRPDSSGTRATFVKYALDGEEPAEGITEDSS    196
                     ||||||||||||||||||||||||||||||||||||||..||||||||||
BPUM_2227___p    150 GKIKNWKELGGKDQKITLVNRPDSSGTRATFVKYALDGATPAEGITEDSS    199

BSNT_03731___    197 NTVKKIIADTPGAIGYLAFSYLTDDKVTALSIDGVKPEAKNVATGEYPIW    246
                     |||||:||:|||||||||||||||||:|.|||||||||..||.:|:|.||
BPUM_2227___p    200 NTVKKLIAETPGAIGYLAFSYLTDDKITPLSIDGVKPEESNVESGKYTIW    249

BSNT_03731___    247 AYQHSYTKGEATGLAKEFLDYLKSEDIQKSIVTDQGYIPVTDMKVTRDAN    296
                     ||:|||||||..||||:|||||.|:::||.||.|||||.|::|||.|||.
BPUM_2227___p    250 AYEHSYTKGEPDGLAKQFLDYLMSDEVQKEIVKDQGYISVSNMKVERDAT    299

BSNT_03731___    297 GKQS--    300
                     |||:  
BPUM_2227___p    300 GKQTDK    305


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