Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03730 and BPUM_2226

See DNA alignment / Visit BSNT_03730 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence pep-align/BSNT_03730___pstC.1.24716.seq
#    -bsequence pep-align/BPUM_2226___pstC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03730___pstC-BPUM_2226___pstC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03730___pstC-BPUM_2226___pstC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03730___pstC
# 2: BPUM_2226___pstC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     254/309 (82.2%)
# Similarity:   283/309 (91.6%)
# Gaps:           1/309 ( 0.3%)
# Score: 1307.0
# 
#
#=======================================

BSNT_03730___      1 MINNRENMSVSERLISSRQNRQLDEVRGRMIVTACALIMIAASVAITIFL     50
                      :...|:...|:|||.|::|||:|||||.::|..||.:|||.|:||||||
BPUM_2226___p      1 -MKQIEHTEASDRLIRSKKNRQMDEVRGSILVRFCAFLMIAVSIAITIFL     49

BSNT_03730___     51 GVKGLQSFLVNGVSPIEFLTSLNWNPTDSDPKYGVLPFIFGSFAVTILSA    100
                     |:||||||:||||||||||||:|||||..:|:||..||||||.|||:|||
BPUM_2226___p     50 GIKGLQSFIVNGVSPIEFLTSINWNPTAENPQYGAFPFIFGSIAVTLLSA     99

BSNT_03730___    101 LIAAPLGIAGAIFMTEIAPNWGKKVLQPVIELLVGIPSVVYGFIGLTVLV    150
                     |||||||||||||||||||.||:|:|||||||||||||||||||||||||
BPUM_2226___p    100 LIAAPLGIAGAIFMTEIAPAWGRKILQPVIELLVGIPSVVYGFIGLTVLV    149

BSNT_03730___    151 PFIAQFKSSGTGHSLLAGTIVLSVMILPTITSISADAMASLPKSLREGSY    200
                     |||..|||||:|||:||||||||:|||||:|||:.|||.|||||||||||
BPUM_2226___p    150 PFIGHFKSSGSGHSVLAGTIVLSIMILPTVTSIATDAMGSLPKSLREGSY    199

BSNT_03730___    201 ALGATRWQTIRKVLVPAAFPTLMTAVVLGMARAFGEALAVQMVIGNTRVL    250
                     |||||||||||:||||||.|||||||||||||||||||||||||||||.|
BPUM_2226___p    200 ALGATRWQTIRRVLVPAALPTLMTAVVLGMARAFGEALAVQMVIGNTRNL    249

BSNT_03730___    251 PESLFDTAGTLTTIITLNMGHTTYGSVENNTLWSMGLVLLVMSFLFILLI    300
                     |||:.||||||||||||||||||||||||||||||||||||:||:|||:|
BPUM_2226___p    250 PESIMDTAGTLTTIITLNMGHTTYGSVENNTLWSMGLVLLVVSFMFILII    299

BSNT_03730___    301 RYLSSRRKV    309
                     ||||||||:
BPUM_2226___p    300 RYLSSRRKI    308


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