Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03726 and BPUM_2223

See DNA alignment / Visit BSNT_03726 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence pep-align/BSNT_03726___pstBB.1.24716.seq
#    -bsequence pep-align/BPUM_2223___pstBB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03726___pstBB-BPUM_2223___pstBB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03726___pstBB-BPUM_2223___pstBB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03726___pstBB
# 2: BPUM_2223___pstBB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     195/264 (73.9%)
# Similarity:   229/264 (86.7%)
# Gaps:           5/264 ( 1.9%)
# Score: 1033.0
# 
#
#=======================================

BSNT_03726___      1 ----MSIATEAVMKQEVYQVNGMNLWYGQHHALKNINLSIYENEVTAIIG     46
                         .::|||.. |:||::||.||||||||||||:|:|:|.|:|||||||
BPUM_2223___p      1 MDLMNAVATETA-KKEVFRVNDMNLWYGQHHALKHIDLAIREHEVTAIIG     49

BSNT_03726___     47 PSGCGKSTFIKTLNLMIQMTPNVKLAGELNYNGSNILKDKVDIVDLRKNI     96
                     ||||||||||||||||::..|.||:.|::.|...||||.:||:|:||||:
BPUM_2223___p     50 PSGCGKSTFIKTLNLMVKTVPGVKITGDMMYKDDNILKGRVDLVELRKNV     99

BSNT_03726___     97 GMVFQKGNPFPQSIFDNVAYGPRVHGTKNKKKLQEIVEKSLKDVALWDEV    146
                     ||||||||||||||||||.||||:||.|:|::|:||.||:|:||||||||
BPUM_2223___p    100 GMVFQKGNPFPQSIFDNVVYGPRIHGVKSKQQLKEIAEKALRDVALWDEV    149

BSNT_03726___    147 KDRLHTSALSLSGGQQQRLCIARALATNPDILLMDEPTSALDPISTRKIE    196
                     ||||...||.||||||||||||||:||:|||||||||||||||:||.|||
BPUM_2223___p    150 KDRLSAPALGLSGGQQQRLCIARAIATSPDILLMDEPTSALDPVSTLKIE    199

BSNT_03726___    197 ELILELKNKYTIVIVTHNMQQAARVSDQTAFFYMGELVECDNTNKMFSNP    246
                     |||::||.||||.||||||||||||||:||||.||||||.::||.|||.|
BPUM_2223___p    200 ELIMKLKEKYTIAIVTHNMQQAARVSDRTAFFLMGELVEVNDTNVMFSEP    249

BSNT_03726___    247 KDQRTLDYISGKFG    260
                     .||||.|||||:||
BPUM_2223___p    250 NDQRTNDYISGRFG    263


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.