Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03688 and BPUM_2205

See DNA alignment / Visit BSNT_03688 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence pep-align/BSNT_03688___comGA.1.24716.seq
#    -bsequence pep-align/BPUM_2205___comGA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03688___comGA-BPUM_2205___comGA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03688___comGA-BPUM_2205___comGA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03688___comGA
# 2: BPUM_2205___comGA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity:     227/357 (63.6%)
# Similarity:   298/357 (83.5%)
# Gaps:           2/357 ( 0.6%)
# Score: 1246.0
# 
#
#=======================================

BSNT_03688___      1 MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKK     50
                     |..||.:.:.|:|||...:|||:||||:|::|.:.||||..|:::|.:.|
BPUM_2205___c      1 MYGIEYLGQELLEEACRMRASDVHIVPKEKEASVSFRVDSDLIQQRTIDK     50

BSNT_03688___     51 EECVRLISHFKFLSAMDIGERRKPQNGSLTLKLKEGNVHLRMSTLPTINE    100
                     :...|||:||||:|:|||||:|:||||||.:.|:.|.|.:|||||||:|:
BPUM_2205___c     51 KSGERLIAHFKFVSSMDIGEKRRPQNGSLAVMLRSGQVFIRMSTLPTVND    100

BSNT_03688___    101 ESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGK    150
                     ||||||::||.::|.|..||||||....|||||.||||:::|||||.|||
BPUM_2205___c    101 ESLVIRILPQDHVPKIKHLSLFPKASTRLLSFLNHSHGLILFTGPTNSGK    150

BSNT_03688___    151 TTTLYSLVQYAKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGL    200
                     |||||||:|:|||:|||||:|||||||||:|:|||||||||||:||:|||
BPUM_2205___c    151 TTTLYSLIQFAKKNFNRNIITLEDPVETRNEEVLQVQVNEKAGITYAAGL    200

BSNT_03688___    201 KAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLHTRDAKGAIYR    250
                     :||||||||||:||||||||||..|:|||:|||||:::||.::||||:||
BPUM_2205___c    201 RAILRHDPDMIVLGEIRDAETARTAIRAALTGHLVMSTLHAKNAKGALYR    250

BSNT_03688___    251 LLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRAS    300
                     :||||:.|.|:|||::|||||||:||.||||...| .:||:.:|..||.:
BPUM_2205___c    251 MLEFGVTMIELEQTMVAIAAQRLIDLTCPFCGETC-QLYCKLNRPVRRTN    299

BSNT_03688___    301 VYELLYGKNLQQCIQEAKGNHANYQYQTLRQIIRKGIALGYLTTNNYDRW    350
                     |:|||:||.|.:||:||||.:|:..|:||:::||||:|||||:.|.|.||
BPUM_2205___c    300 VFELLFGKELGECIKEAKGEYAHSSYETLQRLIRKGVALGYLSKNTYHRW    349

BSNT_03688___    351 VYHEKD-    356
                     ||.|.. 
BPUM_2205___c    350 VYEEASL    356


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