Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03685 and BPUM_2204

See DNA alignment / Visit BSNT_03685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence pep-align/BSNT_03685___comGB.1.24716.seq
#    -bsequence pep-align/BPUM_2204___comGB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03685___comGB-BPUM_2204___comGB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03685___comGB-BPUM_2204___comGB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03685___comGB
# 2: BPUM_2204___comGB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 350
# Identity:     145/350 (41.4%)
# Similarity:   213/350 (60.9%)
# Gaps:          31/350 ( 8.9%)
# Score: 729.5
# 
#
#=======================================

BSNT_03685___      1 -----------------------MTAGGYTLLDGLRLMELQMNKRQAADL     27
                                            :...||||::.|.::.:|::.:|...|
BPUM_2204___c      1 MKKQASKAWSKKDQAECLSKLSQLIQAGYTLIEALTMVNIQLSNKQQQQL     50

BSNT_03685___     28 TGSVTCLREGAPFYQVLKSLSFHKEAVGICYFAETHGELPASMIQSGELL     77
                     |..:..|.||.|||.||:.|.|.:|.:.|..|:|.||.|..::.||...|
BPUM_2204___c     51 TPGIQWLLEGEPFYIVLEKLQFQREVIAILSFSEKHGSLATALEQSARFL    100

BSNT_03685___     78 ERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMET    127
                     |:||.|.|..|.:||||:||||||:::..::|.:||||||.:|.||:...
BPUM_2204___c    101 EKKIKQTDTFKRMLRYPIFLIFTVSIVLILVQQMIIPQFSLLYSSMDTRM    150

BSNT_03685___    128 SRSTDMLFAFFQ--HIDLVII--LLVLFTAGIGIYYWLVFKKKSPARQML    173
                     |.....:|..||  |:.|::|  ..:..|.    ||...|:|||...::.
BPUM_2204___c    151 SWLIQGMFGLFQLLHVSLLLIGCACICLTG----YYTFFFRKKSTLEKLR    196

BSNT_03685___    174 ICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQTFLPFY    223
                     :..|.|.:.|.::|.::|.||||||.||::|||:|:||.|||.|::|||.
BPUM_2204___c    197 VLSRFPFLFKGMRLMHTYLFSLQLSGLLQAGLSMYESLLAFKQQSYLPFL    246

BSNT_03685___    224 RCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFT    273
                     :..:.|:||.|:.|||:...:..|||:|...:.||.||:.||.|.||::|
BPUM_2204___c    247 QEISVQMIEELRRGESMAYQVSISPFFEKHFAAVIEHGEASGMLAREMYT    296

BSNT_03685___    274 YSQFILQRLEHKAQKWTGILQPMIYGFVAAMILLVYLSMLVPMYQMMNQM    323
                     ||||:|:..|.|.:||...|||:|||..|.:||:||||:|:||||:|.|:
BPUM_2204___c    297 YSQFLLENAELKIEKWVSWLQPVIYGLTAILILIVYLSILLPMYQLMEQV    346


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