Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03653 and BPUM_2180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence pep-align/BSNT_03653___yqhR.1.24716.seq
# -bsequence pep-align/BPUM_2180___yqhR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03653___yqhR-BPUM_2180___yqhR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03653___yqhR-BPUM_2180___yqhR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03653___yqhR
# 2: BPUM_2180___yqhR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity: 107/178 (60.1%)
# Similarity: 140/178 (78.7%)
# Gaps: 3/178 ( 1.7%)
# Score: 617.0
#
#
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BSNT_03653___ 1 MMTSEKDTEQNEELNEKQKPPVSMAGRVAATGFCGGVLWSFVAYIAYLFH 50
.::|.::|:|...:.....|:..|.|||||.|||.|.|:.::.::||
BPUM_2180___y 1 ---MKRDEKKNQEEKNQSVQTSSLVARAAATGFVGGVFWGFIGFLTHMFH 47
BSNT_03653___ 51 FSEISPNMILQPFVLGEWKKHGLGTVISIILIGVISIGAAFLYFLLLKRL 100
|||:||||:|||||||||||.||||.|||:|:||:|:||||:|:.||||:
BPUM_2180___y 48 FSEVSPNMLLQPFVLGEWKKGGLGTFISIVLLGVLSVGAAFIYYGLLKRI 97
BSNT_03653___ 101 KTMWPGILYGLVLWLLVFFVFNPIFPDVRTVTELTSDTIITTICIYLLYG 150
|..|.|::||.:||||||:|||||||||:.|.:|...|::||.|:|:|||
BPUM_2180___y 98 KGYWMGLIYGAILWLLVFYVFNPIFPDVKQVQDLQQSTVVTTFCLYILYG 147
BSNT_03653___ 151 LFVGYSISFEYNELNSEKLARALGMHRE 178
:|||||||||||||.|:|||||||...|
BPUM_2180___y 148 MFVGYSISFEYNELTSQKLARALGKKTE 175
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