Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03646 and BPUM_2173

See DNA alignment / Visit BSNT_03646 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence pep-align/BSNT_03646___spoIIIAC.1.24716.seq
#    -bsequence pep-align/BPUM_2173___spoIIIAC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03646___spoIIIAC-BPUM_2173___spoIIIAC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03646___spoIIIAC-BPUM_2173___spoIIIAC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03646___spoIIIAC
# 2: BPUM_2173___spoIIIAC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 68
# Identity:      63/68 (92.6%)
# Similarity:    64/68 (94.1%)
# Gaps:           4/68 ( 5.9%)
# Score: 317.0
# 
#
#=======================================

BSNT_03646___      1 ----MNVIFQIAGVGIVVAFLHTILDQMGKKEYAQWVTLLGFIYILFMVA     46
                         :|||||||||||||||||||||||||||||||||||||||||||||
BPUM_2173___s      1 MGVDVNVIFQIAGVGIVVAFLHTILDQMGKKEYAQWVTLLGFIYILFMVA     50

BSNT_03646___     47 TIVDDLFKKIKAVFLFQG     64
                     ||||||||||||||||||
BPUM_2173___s     51 TIVDDLFKKIKAVFLFQG     68


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.