Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03643 and BPUM_2171
See
DNA alignment /
Visit
BSNT_03643 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence pep-align/BSNT_03643___spoIIIAE.1.24716.seq
# -bsequence pep-align/BPUM_2171___spoIIIAE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03643___spoIIIAE-BPUM_2171___spoIIIAE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03643___spoIIIAE-BPUM_2171___spoIIIAE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03643___spoIIIAE
# 2: BPUM_2171___spoIIIAE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 401
# Identity: 313/401 (78.1%)
# Similarity: 346/401 (86.3%)
# Gaps: 6/401 ( 1.5%)
# Score: 1510.0
#
#
#=======================================
BSNT_03643___ 1 MKRFQWV--LLLAVLIIAGRAEIVQAAGNAEQTEDHAETAEQLAERTAAS 48
|||...| |:|...:||..| .|...|...:.|..||::|...|.:
BPUM_2171___s 1 MKRVTAVLGLMLFFWLIAPHA----GAEEKEPLSNEAPAAEEVAAGQADA 46
BSNT_03643___ 49 LETDKIGEFWNDIMTEYGGLLPESQKGSLMEFINGDKSFSPQEWLKALFS 98
||...|.:||..|:.||||.|||||||::.|.|:|||..|||.||||...
BPUM_2171___s 47 LELHSISDFWETILDEYGGFLPESQKGTVKEMIDGDKELSPQTWLKAFVH 96
BSNT_03643___ 99 YLFHEVLANGKLLGTLILLTIFCVILQLLQNAFQQSTVSKVAYSIVYMVL 148
||||||:||||||||||||||||.:||||||||:||.||||||::|||||
BPUM_2171___s 97 YLFHEVIANGKLLGTLILLTIFCSLLQLLQNAFEQSNVSKVAYALVYMVL 146
BSNT_03643___ 149 IILALNSFHVAINYATEAIQTMTSFILALIPLLLALLASSGGAVSAAFFH 198
||:|||||||||:|||||||||||||||||||||||:|||||.|||.|||
BPUM_2171___s 147 IIIALNSFHVAISYATEAIQTMTSFILALIPLLLALIASSGGLVSAGFFH 196
BSNT_03643___ 199 PVILFLMNTSGLLIQNIVMPLIFLSAILSIVSTMTEQYKVTQLANLLRNI 248
|||||||||||:.||.:|:||||||||||||||:||||||||||.||||:
BPUM_2171___s 197 PVILFLMNTSGVFIQYVVLPLIFLSAILSIVSTLTEQYKVTQLAQLLRNV 246
BSNT_03643___ 249 AIGALAVFLTIFLGVISVQGASAAVTDGITLRTAKFITGNFIPVLGRMFT 298
|||.||||||:||||||||||||||||||.||||||||||||||||||||
BPUM_2171___s 247 AIGGLAVFLTVFLGVISVQGASAAVTDGIALRTAKFITGNFIPVLGRMFT 296
BSNT_03643___ 299 DATDTVISASLLLKNTVGILGVAILICIAAFPAIKVLSLAFIYKLAAAIL 348
||||||||||:|||||||::||||||.|||||||||||||.|||||||||
BPUM_2171___s 297 DATDTVISASVLLKNTVGLVGVAILITIAAFPAIKVLSLALIYKLAAAIL 346
BSNT_03643___ 349 QPLGGGPVITCLDVISKSVIYIFAALAIVSLMFFLSLTVIITAGNLTMMM 398
|||||||:|:|||||||||:|||||||:||||||||:|||||||||||||
BPUM_2171___s 347 QPLGGGPIISCLDVISKSVLYIFAALAVVSLMFFLSITVIITAGNLTMMM 396
BSNT_03643___ 399 K 399
|
BPUM_2171___s 397 K 397
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.