Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03621 and BPUM_2160

See DNA alignment / Visit BSNT_03621 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence pep-align/BSNT_03621___yqiD.1.24716.seq
#    -bsequence pep-align/BPUM_2160___yqiD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03621___yqiD-BPUM_2160___yqiD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03621___yqiD-BPUM_2160___yqiD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03621___yqiD
# 2: BPUM_2160___yqiD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     214/296 (72.3%)
# Similarity:   248/296 (83.8%)
# Gaps:           0/296 ( 0.0%)
# Score: 1099.0
# 
#
#=======================================

BSNT_03621___      1 MTNKLTSFLADRKKTIENQLSVYTEKLDMPDSLKKSMLYSLQAGGKRLRP     50
                     ||:.|..||..||:|||:.|..|.::|.:|..||.||||||:||||||||
BPUM_2160___y      1 MTSNLNEFLTTRKQTIEDYLFTYVQELTIPKDLKSSMLYSLKAGGKRLRP     50

BSNT_03621___     51 LIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKP    100
                     ::|||:||||||:|:|||||||||||||||||||||||||||||||||||
BPUM_2160___y     51 VLVLALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKP    100

BSNT_03621___    101 TNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISAA    150
                     |||||:||||||||||.||||||:||||.:|..|||:|:||:|:||:.:|
BPUM_2160___y    101 TNHKVYGEATAVLAGDALLTESFRLITSQLSSSVSADKKLRIVDELVKSA    150

BSNT_03621___    151 GTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADA    200
                     |..||||||..|||||.:||:|.|||.||.|||.|||.|.|.|||:||.|
BPUM_2160___y    151 GALGMVGGQFDDMEAEQKQVSLAELEYIHARKTGKLLTFSVAAGAMLAGA    200

BSNT_03621___    201 PEEDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTY    250
                     .::|||.||.||.||||.|||||||||||||||||||||||||.|:||||
BPUM_2160___y    201 SDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTANEKSTY    250

BSNT_03621___    251 PSLLSLEGAKHKLDVHIKEAKRLIGGLSLQKDLLYELCDLIAARDH    296
                     ||||:|.|||.|||.||..||.::..|.|::.||:.||||||:|||
BPUM_2160___y    251 PSLLTLSGAKEKLDEHITRAKEIVSNLQLEQQLLHGLCDLIASRDH    296


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