Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03617 and BPUM_2158

See DNA alignment / Visit BSNT_03617 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence pep-align/BSNT_03617.1.24716.seq
#    -bsequence pep-align/BPUM_2158___yqxC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03617-BPUM_2158___yqxC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03617-BPUM_2158___yqxC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03617
# 2: BPUM_2158___yqxC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     175/285 (61.4%)
# Similarity:   206/285 (72.3%)
# Gaps:          44/285 (15.4%)
# Score: 910.0
# 
#
#=======================================

BSNT_03617         1 ---------------------------------------MDKPGEKIDRD     11
                                                            :|||||||.||
BPUM_2158___y      1 MTSKKERLDVLLVEQGLMETREKAKRAIMAGIVYSNENRLDKPGEKIARD     50

BSNT_03617        12 LPLTVKGNPLRYVSRGGLKLEKALKEFPVSVKDKIMIDIGSSTGGFTDCA     61
                     .|||||||||:||||||||||||||||.::|:.|::||||||||||||||
BPUM_2158___y     51 TPLTVKGNPLKYVSRGGLKLEKALKEFDLTVEGKLLIDIGSSTGGFTDCA    100

BSNT_03617        62 LQNGAKQSYAVDVGYNQLAWKLRQDERVVVMERTNFRYATPADFTKGMPE    111
                     |||||.:||||||||||||||||||:||:||||||||::.|||||.|:||
BPUM_2158___y    101 LQNGAVKSYAVDVGYNQLAWKLRQDDRVIVMERTNFRHSVPADFTDGLPE    150

BSNT_03617       112 FATIDVSFISLRLILPVLRTLLVPGSDCMALVKPQFEAGRESVGKKGIVR    161
                     .|:||||||||:||||.|:.:||||.||:||||||||||||.||||||||
BPUM_2158___y    151 VASIDVSFISLKLILPALKHILVPGGDCIALVKPQFEAGRELVGKKGIVR    200

BSNT_03617       162 DPKVHADVLKRMISFSAAEGYICKGLSFSPITGGDGNIEFLLHLHWPGEG    211
                     :|.||..||:.|..|:|.|||..|.:||||||||||||||||||....:.
BPUM_2158___y    201 EPSVHLGVLEEMNEFAAKEGYDVKDVSFSPITGGDGNIEFLLHLKLHPDQ    250

BSNT_03617       212 QDGQELPEEEIMRVVEEAHKTLKEKKADVPE----    242
                     ::.:.||..|:.::|:|||..||||| :.||    
BPUM_2158___y    251 EENEALPVSELEKIVKEAHSILKEKK-NSPEPADT    284


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