Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03585 and BPUM_2148

See DNA alignment / Visit BSNT_03585 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence pep-align/BSNT_03585___ptb.1.24716.seq
#    -bsequence pep-align/BPUM_2148.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03585___ptb-BPUM_2148.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03585___ptb-BPUM_2148.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03585___ptb
# 2: BPUM_2148
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity:     197/301 (65.4%)
# Similarity:   242/301 (80.4%)
# Gaps:           6/301 ( 2.0%)
# Score: 980.5
# 
#
#=======================================

BSNT_03585___      1 MKLKDLIGKASMHKNKTIAVAHAEDEEVIRAVKLAAEHLSARFLLTGDST     50
                     |||.|||.||:..:|||.||||||||||:.|:|:|.|...|||||.|:..
BPUM_2148          1 MKLDDLIMKAAQLQNKTAAVAHAEDEEVLHAIKMAIERKVARFLLVGNKR     50

BSNT_03585___     51 KLNELTSSMQGHQ--VEIVHADTPEESAKLAVRAVHHKTADVLMKGNVPT     98
                     .|.||....:.::  ::|:|:|:||||||:||:||..|.||:||||:|.|
BPUM_2148         51 NLKELVKQHEINEDWIDIIHSDSPEESAKIAVQAVSEKHADILMKGHVTT    100

BSNT_03585___     99 SVLLKAVLNRQEGLRSSSVLSHVAVFDIPDFDRLMFVTDSAMNIAPSLEE    148
                     :||||||||::.|||::|||||||.|::|.|||.::||||||||||.|..
BPUM_2148        101 AVLLKAVLNKEYGLRTASVLSHVAAFEVPGFDRFIYVTDSAMNIAPDLNM    150

BSNT_03585___    149 LRQILQNAVHVAHAVGNNMPKAAALAAVETVNPKMEATVNAAALAQMYKR    198
                     .::|..|||.||.||||:|||.|.|:|||.|||.|::|:.||:||||.||
BPUM_2148        151 FKEITINAVQVAQAVGNDMPKVAVLSAVEVVNPAMDSTLTAASLAQMNKR    200

BSNT_03585___    199 GQIKGCIVDGPLALDNAVSQIAAAQKKISGDVAGNADILLVPTIEAGNIL    248
                     |||.||::|||||||||:||.||:.|.|:.||||:|||||||||||||||
BPUM_2148        201 GQISGCLIDGPLALDNAISQTAASHKNITSDVAGHADILLVPTIEAGNIL    250

BSNT_03585___    249 YKSLIYFAKASVAAVITGAKAPIALTSRADSAENKLYSIALAICASEEYT    298
                     ||||||||.|.|.||:.|||||||||||:|:||:||||||||||.|.   
BPUM_2148        251 YKSLIYFAHAKVGAVVAGAKAPIALTSRSDTAESKLYSIALAICTSN---    297

BSNT_03585___    299 H    299
                      
BPUM_2148        297 -    297


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