Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03565 and BPUM_2136

See DNA alignment / Visit BSNT_03565 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:06
# Commandline: needle
#    -asequence pep-align/BSNT_03565___yqiZ.1.24716.seq
#    -bsequence pep-align/BPUM_2136___yqiZ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03565___yqiZ-BPUM_2136___yqiZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03565___yqiZ-BPUM_2136___yqiZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03565___yqiZ
# 2: BPUM_2136___yqiZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     194/240 (80.8%)
# Similarity:   218/240 (90.8%)
# Gaps:           0/240 ( 0.0%)
# Score: 1007.0
# 
#
#=======================================

BSNT_03565___      1 MIKVEKLSKSFGKHEVLKNISTTIAEGEVVAVIGPSGSGKSTFLRCLNLL     50
                     ||.:|||:|||||:||||.|.|||.|||||||||||||||||||||:|||
BPUM_2136___y      1 MINIEKLTKSFGKNEVLKGIDTTIKEGEVVAVIGPSGSGKSTFLRCINLL     50

BSNT_03565___     51 EKPNGGTITIKDTEITKPKTNTLKVRENIGMVFQHFHLFPHKTVLENIMY    100
                     |||..|.|||:|||||.||||.||||||||||||||||||||||||||.|
BPUM_2136___y     51 EKPTSGVITIQDTEITNPKTNALKVRENIGMVFQHFHLFPHKTVLENITY    100

BSNT_03565___    101 APVNVKKESKQAAKEKAEDLLRKVGLFEKRNDYPNRLSGGQKQRVAIARA    150
                     ||:|||.:||:.:.::|||||:||||.||::|:|||||||||||||||||
BPUM_2136___y    101 APMNVKNQSKEDSIKQAEDLLKKVGLLEKKDDFPNRLSGGQKQRVAIARA    150

BSNT_03565___    151 LAMNPDIMLFDEPTSALDPEMVKEVLQVMKELVETGMTMVIVTHEMGFAK    200
                     |||.||||||||||||||||||||||:|||||.::|||:|||||||||||
BPUM_2136___y    151 LAMTPDIMLFDEPTSALDPEMVKEVLEVMKELAQSGMTLVIVTHEMGFAK    200

BSNT_03565___    201 EVADRVLFMDQGMIVEDGNPKEFFMSPKSKRAQDFLEKIL    240
                     ||||||:|||.|.||||.||.:||.||.|:||:|||:|||
BPUM_2136___y    201 EVADRVIFMDDGKIVEDANPVQFFESPSSQRAKDFLQKIL    240


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