Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03564 and BPUM_2135

See DNA alignment / Visit BSNT_03564 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_03564___yqjA.1.24716.seq
#    -bsequence pep-align/BPUM_2135___yqjA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03564___yqjA-BPUM_2135___yqjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03564___yqjA-BPUM_2135___yqjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03564___yqjA
# 2: BPUM_2135___yqjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     246/322 (76.4%)
# Similarity:   290/322 (90.1%)
# Gaps:           5/322 ( 1.6%)
# Score: 1304.0
# 
#
#=======================================

BSNT_03564___      1 MFKIGYRTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQ     50
                     ||||||||:|||||||:||||:|||.|||:::||||||||||:|:||||.
BPUM_2135___y      1 MFKIGYRTLKTALGTAIAIYIAQLLGLQNYSAAGIITILCIQVTKKRSLL     50

BSNT_03564___     51 ASWARFAACCLAIVFSYLFFELIGYHPFVIGALLLIFIPITVLLKINEGI    100
                     ||.||||||.|||:||||||:||||||||||.:||||||.||||:|.|||
BPUM_2135___y     51 ASGARFAACSLAILFSYLFFDLIGYHPFVIGLMLLIFIPTTVLLRIKEGI    100

BSNT_03564___    101 VTSSVIILHLYMSGGITLAFIWNEVQLITVGIGVALLMNLYMPSLDRKLI    150
                     ||||||||||||||||||..||||:.|||:|:||||:|||||||:|:||.
BPUM_2135___y    101 VTSSVIILHLYMSGGITLHLIWNELLLITIGVGVALIMNLYMPSVDKKLK    150

BSNT_03564___    151 AYRKKIEDNFAVIFAEIERYLLTGEQDWSGKEIPETHQLITEAKNLAYRD    200
                     .|.::||.|||.||.|||:||:||:|||:|||||||||||.|||.|||||
BPUM_2135___y    151 RYSEQIEANFAKIFEEIEQYLITGKQDWTGKEIPETHQLIKEAKALAYRD    200

BSNT_03564___    201 VQNHILRYENLHYHYFKMREKQFEIIERLLPKVTSISITVDQGKMIAEFI    250
                     |:||:||:|||:||||.||:||||||||:|||:||||||.:.|::|||:|
BPUM_2135___y    201 VENHVLRHENLYYHYFNMRQKQFEIIERVLPKITSISITTEHGQIIAEYI    250

BSNT_03564___    251 HDLREAIHPGNTAYKFLKRLADMRKEFEEMPLPATREEFEARAALFHLLG    300
                     .||||.|||||||:|||:||.||::||:::|||.|||||||||||||.||
BPUM_2135___y    251 RDLREHIHPGNTAHKFLRRLIDMKEEFDKLPLPQTREEFEARAALFHFLG    300

BSNT_03564___    301 EMEQYLVIKSYFKGIKAQKSLG    322
                     |||||||:||||||:|.     
BPUM_2135___y    301 EMEQYLVLKSYFKGMKE-----    317


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