Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01008 and BPUM_2117
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:40
# Commandline: needle
# -asequence pep-align/BSNT_01008___ydhQ.1.24716.seq
# -bsequence pep-align/BPUM_2117___ydhQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01008___ydhQ-BPUM_2117___ydhQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01008___ydhQ-BPUM_2117___ydhQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01008___ydhQ
# 2: BPUM_2117___ydhQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 142/240 (59.2%)
# Similarity: 183/240 (76.2%)
# Gaps: 3/240 ( 1.2%)
# Score: 751.0
#
#
#=======================================
BSNT_01008___ 1 MNKYEIIANEMRNRIKNNVYPIDQPIPDEVSLAKEFNSSRMTMKRALDNL 50
|.|||:|:.|:|.||....||.|||||||.|||.||..||||||||||.|
BPUM_2117___y 1 MKKYELISEEIRKRIGTAYYPEDQPIPDENSLAAEFQCSRMTMKRALDLL 50
BSNT_01008___ 51 VAEGLLFRKRGHGTFIIQSAIQDDHVHVVSNEILGLTNLLKDKKIQSKVI 100
||||||||||||||||:::|:....::|..:|..|.|.::.||.:.:::|
BPUM_2117___y 51 VAEGLLFRKRGHGTFIVKAALNQGAINVSGHENKGFTKVMADKNVTTQII 100
BSNT_01008___ 101 QFKVQFPTEEVAAHLSIDQKTPVYYVVRLRIVEGEPYVLEKTYMPTHLIP 150
.|.|.||::|||||||||..||:|.::|||:|:.||||||||:||.:||.
BPUM_2117___y 101 HFDVHFPSKEVAAHLSIDPTTPIYDIIRLRLVDEEPYVLEKTFMPVNLIK 150
BSNT_01008___ 151 GINDDVLHDSIYNHITNVLQLKIAGTHRKIRACKSDHIDQQHLGCKQDDP 200
||:::||..|||.:|:|.|.||:||.|:||||.|||.:|||:|||...||
BPUM_2117___y 151 GIDEEVLLGSIYGYISNDLNLKVAGAHKKIRAAKSDELDQQYLGCDPTDP 200
BSNT_01008___ 201 ILEVEHVGFLDTGIPFEYSFSRHRHDKFVVTSVNIRR--- 237
:||||.|.:|:||.|||||||.||:|||..::|.|.:
BPUM_2117___y 201 VLEVEQVAYLNTGRPFEYSFSHHRYDKFDFSTVEITKTGR 240
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