Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03517 and BPUM_2095

See DNA alignment / Visit BSNT_03517 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence pep-align/BSNT_03517___yqkD.1.24716.seq
#    -bsequence pep-align/BPUM_2095___yqkD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03517___yqkD-BPUM_2095___yqkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03517___yqkD-BPUM_2095___yqkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03517___yqkD
# 2: BPUM_2095___yqkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     166/312 (53.2%)
# Similarity:   228/312 (73.1%)
# Gaps:           9/312 ( 2.9%)
# Score: 891.5
# 
#
#=======================================

BSNT_03517___      1 MKKILLAIGALVTAVIAIGIVFSNMILFIKKKTDEDIIKRETDNGHDVFE     50
                     |||.:..:..::..:|||||.|:|.:::|:|.|||::||||:|.||...|
BPUM_2095___y      1 MKKWIAILAFILCPLIAIGIFFTNKMMYIRKLTDEELIKRESDEGHYHHE     50

BSNT_03517___     51 SFEQMEKTAFVIPSAYGYDIKGYHVAPHD---TPNTIIICHGVTMNVLNS     97
                     .|:|::|....||||:|||:.||.| ||.   |..||::|||||::::||
BPUM_2095___y     51 EFQQLKKEKVCIPSAFGYDLHGYFV-PHSHTHTTRTIVLCHGVTVSLINS     99

BSNT_03517___     98 LKYMHLFLDLGWNVLIYDHRRHGQSGGKTTSYGFYEKDDLNKVVSWLKNK    147
                     :|||.||..|||||::|||||||.|||||||||:|||:||.:||.||:.:
BPUM_2095___y    100 VKYMRLFQKLGWNVMLYDHRRHGMSGGKTTSYGYYEKEDLAQVVKWLRQR    149

BSNT_03517___    148 TNHCGLIGIHGESMGAVTALLYAGAHCSDGADFYIADCPFACFDEQLAYR    197
                     .....:||||||||||||.|||| |.....|:|||||||||.|::||.||
BPUM_2095___y    150 LGENAIIGIHGESMGAVTTLLYA-AKPEASANFYIADCPFASFEDQLLYR    198

BSNT_03517___    198 LRADYRLPSWPLLPIADFFLKLRGGYRAREVSPLAVIDKIEKPILFIHSK    247
                     |:.|:||....:||::|..||.|.||..|:||||.|||::.:|:|||||.
BPUM_2095___y    199 LKTDFRLSGRWILPLSDRVLKWRDGYSIRQVSPLDVIDQVREPVLFIHSL    248

BSNT_03517___    248 DDDYIPVSSTERLYEKKRGPKALYIAENGEHAMSYTKNRDTYRKTVQEFL    297
                     .|||||...:::||.:|:|.|.|:||.:|.||||:::|::.|.:.||.||
BPUM_2095___y    249 HDDYIPCEQSQQLYTRKKGEKQLFIAPHGAHAMSFSENKEAYEQEVQAFL    298

BSNT_03517___    298 D--NMNDSTE--    305
                     .  ::|:...  
BPUM_2095___y    299 QPFDLNEDKRGE    310


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