Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03513 and BPUM_2091

See DNA alignment / Visit BSNT_03513 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence pep-align/BSNT_03513___yqkF.1.24716.seq
#    -bsequence pep-align/BPUM_2091___yqkF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03513___yqkF-BPUM_2091___yqkF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03513___yqkF-BPUM_2091___yqkF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03513___yqkF
# 2: BPUM_2091___yqkF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity:     221/307 (72.0%)
# Similarity:   261/307 (85.0%)
# Gaps:           1/307 ( 0.3%)
# Score: 1147.0
# 
#
#=======================================

BSNT_03513___      1 MRKRKLGTSDLDISEVGLGCMSLGTEKNKALSILDEAIELGINYLDTADL     50
                     |:||::|||||.:||..||||||||||.||||:|||||:|||||||||||
BPUM_2091___y      1 MKKRRIGTSDLLVSEAALGCMSLGTEKGKALSLLDEAIDLGINYLDTADL     50

BSNT_03513___     51 YDRGRNEEMVGDAIQNRRQDIILATKAGNRWDDGSEGWYWDPSKAYIKEA    100
                     ||.|.|||:||.||:|||||:|||||.|||::.|..||.|||||||||||
BPUM_2091___y     51 YDFGTNEEIVGKAIKNRRQDLILATKGGNRFEKGKSGWDWDPSKAYIKEA    100

BSNT_03513___    101 VKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISS    150
                     ||:||.||:||||||||||||||:|.|||||||||||.:|||||||||||
BPUM_2091___y    101 VKQSLKRLQTDYIDLYQLHGGTIDDPIDETIEAFEELVEEGVIRYYGISS    150

BSNT_03513___    151 IRPNVIKEYVKKSNIVSIMMQFSLFDRRPEEWLPLLEEHQISVVARGPVA    200
                     |||||||||.|||||||:|||:||.|||||||..||||..||||||||:|
BPUM_2091___y    151 IRPNVIKEYAKKSNIVSVMMQYSLLDRRPEEWFSLLEEQGISVVARGPLA    200

BSNT_03513___    201 KGLLTEKPLDQASDSMKQNGYLSYSFEELTNARKAMEEVAPDLSMTEKSL    250
                     |||||||||.:||||:::||||.|||:||.....::::||.|||:||.|:
BPUM_2091___y    201 KGLLTEKPLSEASDSIQKNGYLHYSFDELQQVIPSLKKVAYDLSLTELSI    250

BSNT_03513___    251 QYLLAQPAVASVITGASKIEQLRENIQAANARRLTEEEIKALQSHTKQDI    300
                     ||||....|:||:.|||.:|||:||..|||||.|:::|:|||..:||..:
BPUM_2091___y    251 QYLLKNSVVSSVVFGASSVEQLKENAAAANARSLSDQEVKALTYYTKPSV    300

BSNT_03513___    301 YKTHRS-    306
                     |:.||. 
BPUM_2091___y    301 YEAHRVK    307


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.