Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03497 and BPUM_2082

See DNA alignment / Visit BSNT_03497 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence pep-align/BSNT_03497___xerD.1.24716.seq
#    -bsequence pep-align/BPUM_2082___xerD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03497___xerD-BPUM_2082___xerD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03497___xerD-BPUM_2082___xerD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03497___xerD
# 2: BPUM_2082___xerD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     232/296 (78.4%)
# Similarity:   259/296 (87.5%)
# Gaps:           0/296 ( 0.0%)
# Score: 1201.0
# 
#
#=======================================

BSNT_03497___      1 MKDQIKDFIHYVMVERGLSQNTIVSYERDLKSYSLYLTETLHVTDWNHVT     50
                     |.||:.||||::.||||||:||||||:|||::|..:|.....::|...||
BPUM_2082___x      1 MNDQLSDFIHFMTVERGLSENTIVSYKRDLQNYLSFLMTHEQLSDIKDVT     50

BSNT_03497___     51 RIHIIQYLKHLKDSGKSGKTSARHLASIRSFHQFLLREKVTDKDPSVHIE    100
                     |:|||.|||.||:.|||.|||.|||:|||||||||||||||..|||.:||
BPUM_2082___x     51 RLHIIHYLKQLKEEGKSSKTSVRHLSSIRSFHQFLLREKVTKDDPSWNIE    100

BSNT_03497___    101 TQKTERALPKVLALNEVERLLDTPKLTSPFGYRDKAMLELLYATGIRVSE    150
                     ||||||.|||||:|.|||:|||||...:||.|||||||||||||||||||
BPUM_2082___x    101 TQKTERKLPKVLSLGEVEKLLDTPNQHTPFDYRDKAMLELLYATGIRVSE    150

BSNT_03497___    151 MIELKTTDVHLSMGFVRCFGKGRKERIVPIGEAAASAIEEYMTKARGKLL    200
                     |::|...||||:|||:|||||||||||||||||||||||||:.|.|||||
BPUM_2082___x    151 MLDLTLADVHLTMGFIRCFGKGRKERIVPIGEAAASAIEEYLEKGRGKLL    200

BSNT_03497___    201 KNNVSDALFLNHHGKQISRQGFWKNLKKIALEAGIKKELTPHTLRHSFAT    250
                     |...:||||||||||::|||||||||||.||||||:||||||||||||||
BPUM_2082___x    201 KKQPADALFLNHHGKKMSRQGFWKNLKKRALEAGIQKELTPHTLRHSFAT    250

BSNT_03497___    251 HLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLKDVYKQFHPRA    296
                     |||||||||||||||||||||||||||||||||||||||.:|||||
BPUM_2082___x    251 HLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLKDVYHKFHPRA    296


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