Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03480 and BPUM_2069
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence pep-align/BSNT_03480___spoVAF.1.24716.seq
# -bsequence pep-align/BPUM_2069___spoVAF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03480___spoVAF-BPUM_2069___spoVAF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03480___spoVAF-BPUM_2069___spoVAF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03480___spoVAF
# 2: BPUM_2069___spoVAF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 493
# Identity: 367/493 (74.4%)
# Similarity: 438/493 (88.8%)
# Gaps: 3/493 ( 0.6%)
# Score: 2000.0
#
#
#=======================================
BSNT_03480___ 1 MPDHKEEKIRVYRNPAKNEEYFKNRVGMGTSYDVGVRKLTILDKEIQLYY 50
.|::|:.|||:|.|||:|||..||||.|:|:||||:.|.|:||||||
BPUM_2069___s 1 ---MKKDKVNVYRDPKKNEDYFKENVGMGLSFDLGVRKIYIHDQEIQLYY 47
BSNT_03480___ 51 LNGLCDTVYIIHLMRELVAINNRKEDPDELVDIVENRLLNAQVEKVKTLD 100
:||||||.|:|:|::|||.||:.:.:.|::..::||||:|.||.||:|||
BPUM_2069___s 48 VNGLCDTQYVIYLLKELVEINDNEPESDDMARVIENRLVNQQVSKVETLD 97
BSNT_03480___ 101 ETTDQVLSGLVAVIVEGAGFAFIIDVRSYPGRNPEEPDTEKVVRGARDGF 150
|..||||||||||:|||..:||||||||||||.|||||||||||||||||
BPUM_2069___s 98 EAVDQVLSGLVAVVVEGENYAFIIDVRSYPGRMPEEPDTEKVVRGARDGF 147
BSNT_03480___ 151 VENIVVNTALLRRRIRDERLRVKMTKVGERSKTDLSICYIEDIADPDLVE 200
||||:|||||:|||:|||:||.||.|||||||.|:.:||||||||||||:
BPUM_2069___s 148 VENIIVNTALIRRRVRDEKLRYKMLKVGERSKADVCVCYIEDIADPDLVD 197
BSNT_03480___ 201 IVEKEVASIDVDGLTMADKTVEEFIVNQSYNPFPLVRYTERPDVAANHVL 250
|:||||:.|.||||||:|||:||||:.|.|||||||||||||||||||:|
BPUM_2069___s 198 IIEKEVSGIKVDGLTMSDKTIEEFIIKQGYNPFPLVRYTERPDVAANHIL 247
BSNT_03480___ 251 EGHVIIIVDTSPSVIITPTTLFHHVQHAEEYRQAPSVGTFLRWVRFFGIL 300
|||||||.||||||||||||:||||||||||||||:||||||||||.|||
BPUM_2069___s 248 EGHVIIITDTSPSVIITPTTIFHHVQHAEEYRQAPAVGTFLRWVRFLGIL 297
BSNT_03480___ 301 ASTLFLPIWFLFVLQPDLLSDNMKFIGLNKDTHIPIILQIFLADLGIEFL 350
.||..|||||||:|:|.||.|::.:||.||.:|||:|||:||||.|:|||
BPUM_2069___s 298 CSTFLLPIWFLFILEPSLLPDHLSYIGFNKPSHIPVILQVFLADFGVEFL 347
BSNT_03480___ 351 RMAAIHTPTALSTAMGLIAAVLIGEIAIEVGLFSPEVILYVSLAAIGTFT 400
||||||||||||||||||||||||:|||:||||:||||||||||||||||
BPUM_2069___s 348 RMAAIHTPTALSTAMGLIAAVLIGQIAIDVGLFTPEVILYVSLAAIGTFT 397
BSNT_03480___ 401 TPSYELSLANKMSRLVLMILVALFHIKGLVIGFTVLIIAMASIKSLQTPY 450
|||||||:|||:.||:::.|||:|.:.||:||||:|:|.:.||:||||||
BPUM_2069___s 398 TPSYELSVANKIVRLIILALVAIFKLNGLIIGFTLLLIYLTSIRSLQTPY 447
BSNT_03480___ 451 LWPLIPFNGKALWQVLVRTAKPGAKVRPSIVHPKNRLRQPTNS 493
:||.:|||||||||||:||:.||:|||||||||:||.:.|.||
BPUM_2069___s 448 MWPFLPFNGKALWQVLIRTSVPGSKVRPSIVHPQNRSKIPPNS 490
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