Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03453 and BPUM_2053
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence pep-align/BSNT_03453___ypuI.1.24716.seq
# -bsequence pep-align/BPUM_2053___ypuI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03453___ypuI-BPUM_2053___ypuI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03453___ypuI-BPUM_2053___ypuI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03453___ypuI
# 2: BPUM_2053___ypuI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 73/179 (40.8%)
# Similarity: 104/179 (58.1%)
# Gaps: 20/179 (11.2%)
# Score: 381.0
#
#
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BSNT_03453___ 1 MKEAKCERQRHEGKIPNEMGHSIVRAQTQKTGEFLSMVVNTVNDYLNQTT 50
|.|..|:||..:.|.|||.|...:|.:||:.|
BPUM_2053___y 1 ------------------MAHMNVKAQVDQAGVFLSKVATEMNGFLNEAT 32
BSNT_03453___ 51 LESLQAELPIEKGYCCDVLSTLRRMAVFCEGGAEACRRLLMQEPFQEARA 100
|.|::...|..:.|.||:|:|||::||:.|..|..||::..|:.|.:..|
BPUM_2053___y 33 LSSMKRLNPEAEAYYCDILNTLRKLAVYSEDAAAVCRKISQQQTFPQQAA 82
BSNT_03453___ 101 EKTLYNVYHQCIEEFFMPKKDTWCENSRASYTGVSAIEFYHAVPASLEQL 150
::||:.:|||||||||.||||||.|:||::|||.::|.|:|.|.|.:::|
BPUM_2053___y 83 QQTLHRIYHQCIEEFFTPKKDTWYEDSRSAYTGKNSIVFHHEVSAEIKRL 132
BSNT_03453___ 151 LLPLSAAFLKMREELAHYEASGSSMAPIR 179
...|...||.||||| .|..|...|..:
BPUM_2053___y 133 FSSLEKDFLVMREEL-EYTTSHQQMKMV- 159
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