Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03444 and BPUM_2047

See DNA alignment / Visit BSNT_03444 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence pep-align/BSNT_03444___resB.1.24716.seq
#    -bsequence pep-align/BPUM_2047___resB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03444___resB-BPUM_2047___resB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03444___resB-BPUM_2047___resB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03444___resB
# 2: BPUM_2047___resB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 559
# Identity:     400/559 (71.6%)
# Similarity:   473/559 (84.6%)
# Gaps:          17/559 ( 3.0%)
# Score: 2202.0
# 
#
#=======================================

BSNT_03444___      1 MKQVKCECGHINPVGTVLCESCGR---ALQETQPPLADMRYDGSARRSQT     47
                     ||:||||||||||:|||||||||.   |.::....|.|||||||||||||
BPUM_2047___r      1 MKEVKCECGHINPIGTVLCESCGNPIAAKEKNSSKLLDMRYDGSARRSQT     50

BSNT_03444___     48 YNKTIIDKIWNFFSSVKVGIWLIVITLAASAFGTIFPQEAYLPPGAQADT     97
                     |||||:||:||||||||||:|||||||.||:.|||||||.::||||.|.|
BPUM_2047___r     51 YNKTIVDKVWNFFSSVKVGVWLIVITLLASSLGTIFPQERFIPPGASAST    100

BSNT_03444___     98 YYKEQYGTFGQLYYLLGFHHLYGSWWYLLLIASIGISLVICSLDRVIPLY    147
                     ||:||||:||:|||.||||.||.|||:|.|:|||||||||||||||||||
BPUM_2047___r    101 YYEEQYGSFGKLYYTLGFHDLYNSWWFLALVASIGISLVICSLDRVIPLY    150

BSNT_03444___    148 RALKNQGVRRSPAFLRRQRLFSETVTVLNGESKEKIVALLKKKHYRIREK    197
                     |||||||:.:...|:|||||||||..:|:..:.|.|...:|:|.||:||:
BPUM_2047___r    151 RALKNQGIIKKEGFMRRQRLFSETDKMLDEHTYEGIKKAMKQKRYRVREE    200

BSNT_03444___    198 EGSILAEKGRFSRWGPYVNHIGLIIFLIGAMLRFVPGMYVDETLWVREGE    247
                     .|.||||||||||||||||||||||||||:||||||||||||||||||||
BPUM_2047___r    201 NGHILAEKGRFSRWGPYVNHIGLIIFLIGSMLRFVPGMYVDETLWVREGE    250

BSNT_03444___    248 TAAIPGTDGKYYLKNNQFSVETYNSKTEKKVFADAIDRVGDGRVAKNFQT    297
                     ||.||||||:|:||||.||::.|.:..||:||.:||:|.|||:|.|:::|
BPUM_2047___r    251 TAPIPGTDGQYFLKNNAFSIDRYETGNEKEVFENAIERAGDGQVVKSYKT    300

BSNT_03444___    298 DAVLYKREGKIVYGEKPKLKKVTEEDIRVNQPLRFDSFSVYQVDYKENQL    347
                     ||.||||||::|:|||||||:|:|.:|:||:||:||.||:||||:|:|:|
BPUM_2047___r    301 DATLYKREGEVVFGEKPKLKQVSEHNIKVNEPLKFDHFSLYQVDFKQNEL    350

BSNT_03444___    348 DQMVFQLIDKKTKKSFGSLKINLLDPDSVYDLGNGYKVEIASYLPDFYFN    397
                     ||||||||.|.|:||||::|||||:|.|.||||:||||::.||||||||:
BPUM_2047___r    351 DQMVFQLIRKDTEKSFGTVKINLLEPKSEYDLGSGYKVKVMSYLPDFYFD    400

BSNT_03444___    398 QDGEPSTKTKIPNNPAFVFNIITPDKPKGEKSFVAIQETIEGSDNNKYKL    447
                     .||.|||||:.||||||||.:::|:||||||||||||||:||||||.||:
BPUM_2047___r    401 DDGTPSTKTRNPNNPAFVFEMVSPEKPKGEKSFVAIQETVEGSDNNLYKM    450

BSNT_03444___    448 KFDHVETKNITGLTVRKDLTLWVLAVGGAIFMIGVIQGMYWQHRRIWLHS    497
                     |||.|||||:|||||||||||.||.|||.||||||:||||||||||||.:
BPUM_2047___r    451 KFDRVETKNVTGLTVRKDLTLGVLIVGGIIFMIGVVQGMYWQHRRIWLSA    500

BSNT_03444___    498 QDGAVMVAGHTNKNWFGLKKDLAFILADSGLTEPVDQKELIKTQK-----    542
                     :||.|.|||||||||||||.||..||:|||:.:|||||||..|..     
BPUM_2047___r    501 RDGKVFVAGHTNKNWFGLKSDLGVILSDSGIKQPVDQKELPDTTSISKSK    550

BSNT_03444___    542 ---------    542
                              
BPUM_2047___r    551 GEGLDGSSQ    559


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03444 and BPUM_2047

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
