Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03427 and BPUM_2036
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:57
# Commandline: needle
# -asequence pep-align/BSNT_03427___ypbB.1.24716.seq
# -bsequence pep-align/BPUM_2036___ypbB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03427___ypbB-BPUM_2036___ypbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03427___ypbB-BPUM_2036___ypbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03427___ypbB
# 2: BPUM_2036___ypbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity: 172/352 (48.9%)
# Similarity: 236/352 (67.0%)
# Gaps: 2/352 ( 0.6%)
# Score: 871.5
#
#
#=======================================
BSNT_03427___ 1 MSLNYFDIMVLDCLCKINGERSGSAVFHLFKGKRSSQTIQDAGLFQTAKY 50
|:|:|.|:|::|.:.|:|||||.|||:||||||:||||||||.||:.::|
BPUM_2036___y 1 MTLHYLDVMLMDSVYKLNGERSISAVYHLFKGKKSSQTIQDASLFELSRY 50
BSNT_03427___ 51 FGMAAQCSRSDVSESLDKLEKHSYLSPMSETDTYKVTASGAAVLRHALSE 100
||.....:|..::.|..|||:..|:....| |..:|.:|..:|....||
BPUM_2036___y 51 FGCYPGFTRDQLNRSALKLEEKHYIRKNDE--TLSITEAGQRMLHQHFSE 98
BSNT_03427___ 101 RPWPVHCHGAHYQQAAGVLWKRLSLLVQVLSHKQQGSRQYIPVTKDHKTL 150
:|.|.:.|||.|...|.:||.|||||||||||...||.||:|:.:|....
BPUM_2036___y 99 KPMPTYFHGAKYHDKAKMLWMRLSLLVQVLSHHMAGSHQYVPIQRDVSVQ 148
BSNT_03427___ 151 HWVKKYLSRHTDHIEMAKSLFAMLEAHLKKIENKAAQIFVYSLTSHHRIG 200
.|.|.:|.:|....:::|.|...||..|..:..:.|.||||||||:.|||
BPUM_2036___y 149 SWTKSFLKQHQQKSKLSKDLHHELEKLLMYLSEQEAVIFVYSLTSNERIG 198
BSNT_03427___ 201 YTSRQLADTLKEDEWYVYIMFWASVHYFIHSLPECEDALLKDLLSDVHLD 250
.|.:|:|:.:|||.||||::||..:||||.|..:.|..:|:.|:.|:...
BPUM_2036___y 199 RTYQQMAEWMKEDVWYVYLLFWNVLHYFIQSAQKGEAPILQQLIGDLEFK 248
BSNT_03427___ 251 NALTESTRKTWQMVKQGFPIHRIAEIRKLKTATIEDHIVEISLHEPAFMI 300
..||.||:||.::|::||.|.:||.||.||.|||||||||:|:|||:|.|
BPUM_2036___y 249 RVLTTSTQKTLELVQKGFDIEQIAHIRSLKKATIEDHIVELSIHEPSFSI 298
BSNT_03427___ 301 NDYVSAEDQLQIAEFAKRMRTNKIKQIRDGLEQRFSYFQIRLALTKQVQQ 350
..|||.|:|..|...||.::|||:|.|::.||..|:|||||||||:.|:.
BPUM_2036___y 299 EPYVSIEEQQAILAVAKELQTNKMKLIKEKLEHPFTYFQIRLALTRMVKA 348
BSNT_03427___ 351 YD 352
..
BPUM_2036___y 349 NG 350
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