Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03412 and BPUM_2026
See
DNA alignment /
Visit
BSNT_03412 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_03412___sleB.1.24716.seq
# -bsequence pep-align/BPUM_2026___sleB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03412___sleB-BPUM_2026___sleB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03412___sleB-BPUM_2026___sleB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03412___sleB
# 2: BPUM_2026___sleB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity: 211/310 (68.1%)
# Similarity: 246/310 (79.4%)
# Gaps: 12/310 ( 3.9%)
# Score: 1088.5
#
#
#=======================================
BSNT_03412___ 1 MKSKGSIMACLIL-FSFTI--TTFFNTETISAFSNQVIQRGATGDDVVEL 47
..|...|..::| ||..: |:...||...||::|||||||||:|||||
BPUM_2026___s 1 -MDKACFMKKIVLIFSIVLLATSLMTTEKSEAFTSQVIQRGATGEDVVEL 49
BSNT_03412___ 48 QARLQYNGYYNGKIDGVYGWGTYWAVRNFQDQFGLKEVDGLVGAKTKQTL 97
||||||||:|||||||||||||||||||||.|:|:|:||||||.:||..|
BPUM_2026___s 50 QARLQYNGFYNGKIDGVYGWGTYWAVRNFQSQYGVKKVDGLVGKQTKSLL 99
BSNT_03412___ 98 ICKSKYYREYVMEQLNKGNTFTHYGKIPLKYQTK-PSKAATQ-KARQQAE 145
:.|:|||:::|.:||.|||.|||||..||..||| |:|.::| |..|.|:
BPUM_2026___s 100 VQKTKYYKDFVQQQLQKGNEFTHYGGKPLDQQTKAPAKRSSQKKTAQGAK 149
BSNT_03412___ 146 ARQKQPAEKTTQQPKANANKQQNNTPAKARKQDAVAANMPGGFSNNDIRL 195
..||..:..:.:..|.:.|:|.|.|| || .|||||||||||||:|
BPUM_2026___s 150 ENQKSQSGASGKSAKQSGNQQANQTP----KQ--TAANMPGGFSNNDIQL 193
BSNT_03412___ 196 LAQAVYGEARGEPYEGQVAIAAVILNRLNSPLFPNSVAGVIFEPLAFTAV 245
|:||||.||||||||||||||||||||||:..|||::|||||||||||||
BPUM_2026___s 194 LSQAVYSEARGEPYEGQVAIAAVILNRLNNSTFPNTIAGVIFEPLAFTAV 243
BSNT_03412___ 246 ADGQIYMQPNETAREAVLDAINGWDPSEEALYYFNPDTATSPWIWGRPQI 295
||||.||.|||||::||.||||||||||.|:|||||||||||||||||||
BPUM_2026___s 244 ADGQFYMSPNETAKKAVFDAINGWDPSESAVYYFNPDTATSPWIWGRPQI 293
BSNT_03412___ 296 KRIGKHIFCE 305
||||||||||
BPUM_2026___s 294 KRIGKHIFCE 303
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.