Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03374 and BPUM_2000

See DNA alignment / Visit BSNT_03374 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence pep-align/BSNT_03374___aroH.1.24716.seq
#    -bsequence pep-align/BPUM_2000___aroH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03374___aroH-BPUM_2000___aroH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03374___aroH-BPUM_2000___aroH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03374___aroH
# 2: BPUM_2000___aroH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:      89/127 (70.1%)
# Similarity:   103/127 (81.1%)
# Gaps:           0/127 ( 0.0%)
# Score: 473.0
# 
#
#=======================================

BSNT_03374___      1 MMIRGIRGATTVERDTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT     50
                     ||.|||||||||..|||.|:|.|||||||.||..|...||.|||:|:|||
BPUM_2000___a      1 MMFRGIRGATTVTEDTETEVLNKTKQLLEAIISRNEVDPERVVQILISAT     50

BSNT_03374___     51 PDLHAVFPAKAVRELSGWQYVPVTCMQEMDVTGGLKKCIRVMMTVQTDVP    100
                     .|:|:||||||:|:..||.|||||||||:|:.||||.||||:||||||..
BPUM_2000___a     51 QDIHSVFPAKALRQFEGWTYVPVTCMQELDIHGGLKHCIRVLMTVQTDTK    100

BSNT_03374___    101 QDQIRHVYLEKAVVLRPDLSLTKNTEL    127
                     |:.::|||||:||.|||||.||||.||
BPUM_2000___a    101 QEDVQHVYLEEAVTLRPDLQLTKNKEL    127


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