Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03368 and BPUM_1996
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence pep-align/BSNT_03368___trpF.1.24716.seq
# -bsequence pep-align/BPUM_1996___trpF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03368___trpF-BPUM_1996___trpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03368___trpF-BPUM_1996___trpF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03368___trpF
# 2: BPUM_1996___trpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 220
# Identity: 104/220 (47.3%)
# Similarity: 147/220 (66.8%)
# Gaps: 6/220 ( 2.7%)
# Score: 538.5
#
#
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BSNT_03368___ 1 MKKPALKYCGIRSLKDLQLAAESQADYLGFIFAESKRKVSPEDVKKWLNQ 50
.||.|||||..||:|::..|:||||.:|||||.|||:|.|..||:||::
BPUM_1996___t 1 -MKPFLKYCGAGSLEDVKCIAQSQADAIGFIFAPSKRQVDPNQVKQWLSK 49
BSNT_03368___ 51 ARVEKQVAGVFDNESIETMSRIAKSLKLDVIQLHGDEKPADAAALRKLTG 100
::..|::.|||.||:.:.:..|.|.:.||::||||||...||..:::.||
BPUM_1996___t 50 SQCRKKITGVFVNENTQKVCDITKHIPLDIVQLHGDETKEDAKQIKQQTG 99
BSNT_03368___ 101 CEIWKALHHQDN---TTQEIARFKDNVDGFVIDSSVKGSRGGTGVAFSWE 147
..:||..||..: |..::..|...||||:||:.|||.|||:|.||:||
BPUM_1996___t 100 TVVWKVFHHDPDIKGTLDKMTAFAPFVDGFLIDAKVKGMRGGSGTAFTWE 149
BSNT_03368___ 148 CVPEYQQAA--IGKRCFIAGGVNPDSITGLLKWQPEGIDLASGIEKNGQK 195
.||.|.|.| :.|.|.||||:.|:::..||.:.|:.|||:||||::|:|
BPUM_1996___t 150 AVPLYNQHAKRLEKTCIIAGGITPETLPELLAYGPKAIDLSSGIEEDGKK 199
BSNT_03368___ 196 DQNLMSLLEERMNRYVSISE 215
....:..|||||...|.||:
BPUM_1996___t 200 SSAKIKALEERMLNNVRISK 219
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